Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01508 and BL03197
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:59
# Commandline: needle
# -asequence dna-align/BSNT_01508___rpsN.1.5803.seq
# -bsequence dna-align/BL03197___rpsN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01508___rpsN-BL03197___rpsN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01508___rpsN-BL03197___rpsN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01508___rpsN
# 2: BL03197___rpsN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity: 205/271 (75.6%)
# Similarity: 205/271 (75.6%)
# Gaps: 2/271 ( 0.7%)
# Score: 749.0
#
#
#=======================================
BSNT_01508___ 1 TTGGCTAAAAAATCAAAAGTGGCAAAAGAGTTAAAACGCCAACAGCTTGT 50
.||||.||.|||||||||.|.||.|||||...|||.||||||.|||||||
BL03197___rps 1 GTGGCCAAGAAATCAAAAATTGCTAAAGAAAAAAAGCGCCAAAAGCTTGT 50
BSNT_01508___ 51 TGAGCAATACGCTGGTATTAGACGCGAGTTGAAGGAAAAAGGAGATTACG 100
|||.|||||.||.|...|.|||...||..|.||.||||||||.||||||
BL03197___rps 51 TGAACAATATGCAGAACTCAGAAAAGAACTAAAAGAAAAAGGCGATTAC- 99
BSNT_01508___ 101 AG-GCACTCAGCAAGCTGCCAAGAGATTCAGCACCGGGAAGGCTCCACAA 149
|| ||..|.||||||||.||..|.||.||.||.||.|.||||||.||.||
BL03197___rps 100 AGAGCTTTGAGCAAGCTTCCGCGCGACTCGGCGCCAGCAAGGCTGCATAA 149
BSNT_01508___ 150 CCGCTGTATGGTAACGGGACGCCCGAGAGGATATATGAGGAAGTTTAAAA 199
||||||....||.||.|||.|.|||||||||||||||||.||||||||||
BL03197___rps 150 CCGCTGCGAAGTGACCGGAAGGCCGAGAGGATATATGAGAAAGTTTAAAA 199
BSNT_01508___ 200 TGTCCAGAATCGCTTTCAGGGAGCTGGCCCATAAAGGCCAGGTTCCCGGT 249
||||..|.|||||.|||||.||..|.||..|||||||||||.||||.|||
BL03197___rps 200 TGTCGCGGATCGCGTTCAGAGAATTAGCATATAAAGGCCAGATTCCAGGT 249
BSNT_01508___ 250 GTGAAAAAAGCAAGCTGGTAA 270
|||||.|||.|.|||||||||
BL03197___rps 250 GTGAAGAAATCCAGCTGGTAA 270
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