Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01516 and BL03194
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_01516___cspR.1.5803.seq
# -bsequence dna-align/BL03194___cspR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01516___cspR-BL03194___cspR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01516___cspR-BL03194___cspR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01516___cspR
# 2: BL03194___cspR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity: 367/477 (76.9%)
# Similarity: 367/477 (76.9%)
# Gaps: 6/477 ( 1.3%)
# Score: 1408.0
#
#
#=======================================
BSNT_01516___ 1 GTGGCATTACATGTCGTTTTATATCAACCAGAAATTCCCGCTAACACAGG 50
.|||||||.||||||||..|||||||||||||||||||.||.||||||||
BL03194___csp 1 TTGGCATTGCATGTCGTACTATATCAACCAGAAATTCCTGCAAACACAGG 50
BSNT_01516___ 51 GAATATTGCACGTACTTGTGCAGCAACCAATACAACGCTACACCTGATTC 100
.|||||.|||||.||||||||||||||..|||||||.||.||..|.||..
BL03194___csp 51 AAATATCGCACGGACTTGTGCAGCAACAGATACAACACTTCATTTAATCA 100
BSNT_01516___ 101 GTCCGCTCGGCTTTTCAACGGATGATAAAATGCTGAAGCGTGCCGGACTC 150
|.|||||||||||||||||.||.|||||||||||.|||||.||.||.||.
BL03194___csp 101 GACCGCTCGGCTTTTCAACCGACGATAAAATGCTCAAGCGGGCAGGTCTT 150
BSNT_01516___ 151 GATTATTGGGAGTTTGTTAATGTTGTGTATCATGATTCGTTAGAAGAATT 200
|||||||||||.||.||.|||||.||.||.||.||.||.||.||.|||||
BL03194___csp 151 GATTATTGGGAATTCGTCAATGTCGTCTACCACGACTCATTGGATGAATT 200
BSNT_01516___ 201 GTTTGAGGCATATGAAAAAGGCCAGTTTTTCTTTATTACAAAATTTGGCC 250
||||||.||..||....||||||..||||||||.||||||||.||.||.|
BL03194___csp 201 GTTTGATGCCCATCCTGAAGGCCGTTTTTTCTTCATTACAAAGTTCGGTC 250
BSNT_01516___ 251 AGCAGCCTCATACATCATTTGATTACACTGATCTTGACGAGGATTATTTC 300
|..|.||.||.||.|||||||||||..|.||||...||||.|||||.|||
BL03194___csp 251 AAAAACCGCACACTTCATTTGATTATTCAGATCAAAACGAAGATTACTTC 300
BSNT_01516___ 301 TTCGTGTTCGGAAGAGAAACAAGCGGTTTGCCAAAGGATTTAATTCAAAA 350
||.||.|||||.|||||.||.|.|||.|||||.||.||..|.||..||.|
BL03194___csp 301 TTTGTCTTCGGCAGAGAGACGAACGGCTTGCCGAAAGAGCTGATCGAACA 350
BSNT_01516___ 351 TAATATGGACCGCTGCCTGCGTCTTCCGATGACAGAGCATGTCAGATCGT 400
.||.|||||.|||||.|||||.||.||||||||||||||.||||||||..
BL03194___csp 351 AAACATGGATCGCTGTCTGCGCCTGCCGATGACAGAGCACGTCAGATCAC 400
BSNT_01516___ 401 TAAACCTGTCCAATACTGCCGCGATTCTTGTTTATGAAGCGCTGCGCCAG 450
|.|||.|.||.||.|||||.||.||.||.||.|||||.|||||.||||||
BL03194___csp 401 TGAACTTATCAAACACTGCGGCAATCCTCGTGTATGAGGCGCTTCGCCAG 450
BSNT_01516___ 451 CAAAATTACCGTGATTTAA---AATAG 474
||.||||||.|.|||||.| ||
BL03194___csp 451 CAGAATTACAGAGATTTGACTTAA--- 474
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