Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01518 and BL03192
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_01518___yhbE.1.5803.seq
# -bsequence dna-align/BL03192___yhbE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01518___yhbE-BL03192___yhbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01518___yhbE-BL03192___yhbE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01518___yhbE
# 2: BL03192___yhbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 802
# Identity: 449/802 (56.0%)
# Similarity: 449/802 (56.0%)
# Gaps: 179/802 (22.3%)
# Score: 960.5
#
#
#=======================================
BSNT_01518___ 1 ATGGATGTAGTGGAAAAGCTGGTGATAAACGGATCAGGAAGTTCAAAGGG 50
.||||.||..|..||||||||||||..||.||||||...||
BL03192___yhb 1 ---------ATGGAGAATTTATTGATAAACGGATTCGGCAGTTCAGGCGG 41
BSNT_01518___ 51 AGGAACATTTCAATCTGTTGAGATTAATGGCAGCGGGACAGTGGCCGGGG 100
|||..|.|.||||.|.||||||.|.||.||||..||.||..|...|||.|
BL03192___yhb 42 AGGCGCGTATCAAACGGTTGAGTTAAACGGCAAAGGTACGATTAACGGCG 91
BSNT_01518___ 101 ACGTGGAGTGTGACACTTT----TTCTTTTAATGGAAACGGAAAAGTCGA 146
|..|.||.||.||.|..|| |.| |..||.|.|||.|..||..|
BL03192___yhb 92 ATATTGACTGCGAAAGGTTCAGCTGC----AGCGGCACCGGGACTGTAAA 137
BSNT_01518___ 147 CGGCAG-CGTCAAAGCGAAAGCGGTAACCATCAGCGGTTCA-GGAAAGAT 194
||| || |||.||||||.|.|.|.|.|..|||||||| .|| |.|||..|
BL03192___yhb 138 CGG-AGACGTAAAAGCGGATGAGCTGAGAATCAGCGG-CCATGCAAAACT 185
BSNT_01518___ 195 ACATGGAGACGTTGAAGC----------AGAATCTA----TCCGGA---- 226
|.|.||.|.|.|.||.|| |||||..| ||.|.|
BL03192___yhb 186 AAACGGCGCCATCGAGGCTTCAAAGGTTAGAATTGATGGTTCTGCAAAAG 235
BSNT_01518___ 227 TGAATGGCACTGGTTTTATTC-AAGGAGAGGTATCTGCAAAACAATTGAA 275
||.|||||..|| || |||.||| |||.| |.||
BL03192___yhb 236 TGGATGGCGATG-------TCGAAGCAGA---------AAAGC---TTAA 266
BSNT_01518___ 276 AAT---------CGCTGGATCATCAACATTTGGCGGCAC-TGT-CAAGGC 314
||| |||.|| || ||.|||| || ||| .|||||
BL03192___yhb 267 AATCTTAGGCTACGCCGG--------CA-TTAGCGG-ACATGTGAAAGGC 306
BSNT_01518___ 315 TGATG--GCATTGA-CATTAGCGGAAAAGCTGTC-ATGGAAGC--AGATT 358
||.| || || |.||.||||||||.| ||| ||.| || |||.|
BL03192___yhb 307 -GACGAAGC---GATCGTTCGCGGAAAAAC-GTCGATCG--GCAAAGACT 349
BSNT_01518___ 359 -----GTGAAACAGAAACCTTTCAAT-CAGAAGGGAAATGCAAAATCAGC 402
|||.|||| |||...| |||||||..|.|..|.||||..|
BL03192___yhb 350 GCCAAGTGGAACA------TTTTTCTGCAGAAGGCTATTTTACAATCGAC 393
BSNT_01518___ 403 GGGCTTTTAAATGCAGACCAGGTGATC---ATTAAGCTTTCTGCA----G 445
|||||.|||||.||.||.|| .||| ||||||.|| || |
BL03192___yhb 394 GGGCTGTTAAACGCGGAGCA---AATCGAAATTAAGGTT----CACGGCG 436
BSNT_01518___ 446 GGGAAAGCTATGTGCGGGAGATCGGCTGCCG--CCATCTTCAAGTGACCT 493
|.|||||..|.|||...||.||||||||||| ..|||.|| ||..||
BL03192___yhb 437 GCGAAAGTAAAGTGAAAGAAATCGGCTGCCGGAGGATCGTC---TGCACT 483
BSNT_01518___ 494 GCAGA--AAAGGAATGCTGACATTGCTCAGATTAATGCCGCAGCCTGTT- 540
|||.| ||..||| |||| |.|||...||.|| ||.|||.|.||
BL03192___yhb 484 GCACATCAATCGAA-GCTG----TTCTCGTTTTTAT--CGGAGCTTATTT 526
BSNT_01518___ 541 -----------CTAACAGCAGAGCTGATCGAAGGTGA-CGTGATTGAA-T 577
||..|.||.||||||||.|||||.|| |.| ||.||| |
BL03192___yhb 527 CTCCTCCAAGGCTGTCTGCCGAGCTGATTGAAGGGGATCAT-ATCGAACT 575
BSNT_01518___ 578 TGACAAATACAAAGGCGAAAACCGTGCGCGGAAATAAAGTGGTCATCGGC 627
|| |.|||||.|..||.|||...||.|||||.|||...||..||||||||
BL03192___yhb 576 TG-CCAATACGACCGCAAAAGTTGTCCGCGGCAATTCGGTTATCATCGGC 624
BSNT_01518___ 628 CCGGATT---------GCCAGATTGAAACCGTCGAATACAGTGGGGACTA 668
....||| |||.|||||| |.||| || |..|| ||
BL03192___yhb 625 GAAAATTGCGACATCGGCCTGATTGA-------GTATA-AG-GAAGA-TA 664
BSNT_01518___ 669 TACCTGTGATCCAAGCG-----CGTCGG-TTGAAACATCCACAAAGTTGT 712
|.|..|||..|.||.|| .||||| ..|||| |..||.||.|
BL03192___yhb 665 TCCGGGTGGCCGAAACGGCAAAAGTCGGAGAGAAA-----AGGAAATTAT 709
BSNT_01518___ 713 AA 714
|.
BL03192___yhb 710 AG 711
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