Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01519 and BL03191
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:00
# Commandline: needle
# -asequence dna-align/BSNT_01519___yhbF.1.5803.seq
# -bsequence dna-align/BL03191___yhbF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01519___yhbF-BL03191___yhbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01519___yhbF-BL03191___yhbF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01519___yhbF
# 2: BL03191___yhbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 814
# Identity: 428/814 (52.6%)
# Similarity: 428/814 (52.6%)
# Gaps: 218/814 (26.8%)
# Score: 865.0
#
#
#=======================================
BSNT_01519___ 1 ATGGAGACAACAAAACTGGGAAATTTAAAATTATATGGCGCTGGGCATGC 50
|||.||| ||||..|| ||.|||.||.|.|| ||.|
BL03191___yhb 1 ATGAAGA-AACACGAC--------TTGAAAATACACGG--------ATCC 33
BSNT_01519___ 51 CGCAG---GAGGCGCGTATCA---CA--ATGTCAGCATCAAAGGAGAAGG 92
.|.|| |.||.|||.|||| || .|||...|||.|.|||.|||||
BL03191___yhb 34 GGAAGCGCGGGGGGCGGATCATTCCATCGTGTTCTCATTAGAGGTGAAGG 83
BSNT_01519___ 93 TGTAGTTGGA------GAAGGGCTGTCTGCTGTAGGATGCCGCATATACG 136
..| || |||....||..||| |.|..||.|.|.|.|.|||
BL03191___yhb 84 AAT-----GATCACGGGAAACATTGATTGC-GAAAAATTCAGTACACACG 127
BSNT_01519___ 137 GAACGGGCCTTTTTCTCGGAAAAGCAGAGACTG---AGCGGCTGC----- 178
|.|| |||| || |||| .|||.| ||
BL03191___yhb 128 GTAC-----------------AAGC-GA-ACTGTCAGGCGAC-GCGAAAA 157
BSNT_01519___ 179 ------------GTGTGCTCGGAGAAAGTGAATGTAAAGGCGAT------ 210
||||.|.|||.||||..|| |||
BL03191___yhb 158 TTAAAAGCTTTAGTGTACACGGGGAAACAGA----------GATCCGGGG 197
BSNT_01519___ 211 ----CTGACAGCCGGCAAAATCAATATATATGGGATAATGAAAGTCAGCG 256
||||.|||.|.||||..||...||||.||.| |.|||
BL03191___yhb 198 GAGGCTGAAAGCTGACAAAGCCAGAGTATACGGCA----------CGGCG 237
BSNT_01519___ 257 GCTCACTTCAATTT-------------GAT---CGATTCAATC-TGAAAG 289
|.| .||| ||| ||||.||..| ||||||
BL03191___yhb 238 GAT-------GTTTCTGAGAACGCCGAGATCAGCGATGCAGCCGTGAAAG 280
BSNT_01519___ 290 GC--CAGACTGAA-ATTGGCGGGAATATGACTGGAGAATCCTGCGATGTG 336
|| || |.|| ||.||.||.||||||||.|..||..|.||||||||.
BL03191___yhb 281 GCATCA---TCAATATCGGGGGAAATATGACGGCTGACACTTGCGATGTC 327
BSNT_01519___ 337 AAAGGGAAGCTTAGCGTAAAAGGTGATTGTGAAACAGA-AATGTTCCA-T 384
|||||....||.|.|||||.|||.|||||.||..|||| .||.||..| |
BL03191___yhb 328 AAAGGCGCCCTGAACGTAAGAGGCGATTGCGAGGCAGAGGATTTTAAACT 377
BSNT_01519___ 385 GTCACAGGCTGTGTTGATGTATCGGGGTTATTAAATTCGGGTGAGATCAA 434
| ||.|||.|..|.||||||..|||..|..|.||..| |
BL03191___yhb 378 G--ACGGGCAGCCTGGATGTAAAGGGCCTCCTGAACGC-----------A 414
BSNT_01519___ 435 GCTGGGATTGAGCCAT--GATATAAG-------------CCATGTGCAGG 469
|.||.|||||| ||| |.|..||| |.||..|| |
BL03191___yhb 415 GGTGTGATTGA--CATCGGCTTAAAGTACGGAAACAGTTCGATTGGC--G 460
BSNT_01519___ 470 AAATCGGCGGAACAACAATTACA----GTGAAAAGACGCGCGAGTTTTTT 515
|.||||||||.||....|||| | ||.||.|.|||||.|...||.||
BL03191___yhb 461 ATATCGGCGGTACGGATATTA-AGATCGTCAATAAACGCGGGCTGTTGTT 509
BSNT_01519___ 516 TAACCGGAAGAAAGTGAAG----CTGATCGCC---GATGTCATAGAAGGA 558
||| .|||||..||.| || .|||.| ||.| ||.||||||
BL03191___yhb 510 TAA----TAGAAACGGAGGTACTCT-CTCGGCAGGGACG--ATTGAAGGA 552
BSNT_01519___ 559 GATCG-GGTTTATTTGGAGAATACCGAAGCGGC---AGTTGTCAGGGGAA 604
|| || ..||||..||||.||.|| .||||| |.|.|||||.||||
BL03191___yhb 553 GA-CGATATTTACCTGGAAAACAC---GGCGGCCCGAATGGTCAGAGGAA 598
BSNT_01519___ 605 AAGAAGTG-ATCATCGGGCCGGGATGCAGTATCG-GAACAATTGAGTACG 652
|....||| || ||.||.||||||||||..||.| ||| |.||||.|||.
BL03191___yhb 599 ACCGCGTGCAT-ATAGGACCGGGATGCAAGATTGAGAA-AGTTGAATACA 646
BSNT_01519___ 653 AAAACAAATA---TGAATGCGATCCGCATTCACAGATTAAAGA-----AA 694
|.|.||..|| .|.|| .||||.|.||..||.|.||.|| ||
BL03191___yhb 647 AGAGCAGCTACCGGGTAT---CTCCGAAGTCTGAGGTAAATGAGGATCAA 693
BSNT_01519___ 695 AAACAAAACTGTAA 708
.|.||| |||
BL03191___yhb 694 CAGCAA-----TAA 702
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