Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01590 and BL03170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:03
# Commandline: needle
# -asequence dna-align/BSNT_01590___yhcV.1.5803.seq
# -bsequence dna-align/BL03170___yhcV.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01590___yhcV-BL03170___yhcV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01590___yhcV-BL03170___yhcV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01590___yhcV
# 2: BL03170___yhcV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 305/437 (69.8%)
# Similarity: 305/437 (69.8%)
# Gaps: 25/437 ( 5.7%)
# Score: 1022.5
#
#
#=======================================
BSNT_01590___ 1 ---------ATGAGTTCAGTTAAAGATACAATGACAACGCAGGTGGCAAC 41
||.|| || ||.|.|||.|.|..||.|||||.||
BL03170___yhc 1 TTGACGACAATCAG--CA-------ATGCGATGTCTAGACAAGTGGCGAC 41
BSNT_01590___ 42 CGTTTCTCCGAATCAAACGATTCAGGAAGCGGCTTCTCTAATGAAACAGC 91
..|||||.|.|||||||||.||||.|||||||||....|.||||..|..|
BL03170___yhc 42 AATTTCTTCCAATCAAACGGTTCAAGAAGCGGCTGAGTTGATGAGCCGCC 91
BSNT_01590___ 92 ATAACGTCGGGGCGATCCCCGTTGTAGAGCAAGGTGTTTTAAAAGGAATG 141
||||.||.||.|||||.||.||.|||||.|||||.||.||||||||.|||
BL03170___yhc 92 ATAATGTAGGTGCGATTCCGGTCGTAGATCAAGGCGTATTAAAAGGCATG 141
BSNT_01590___ 142 CTGACTGACCGTGACATTACATTAAGAACTACAGCTCAGGGCCGTGATGG 191
.|.||.||||||||.||.||..|.|||||.|||||..|.||||..||.||
BL03170___yhc 142 ATCACAGACCGTGATATCACGCTCAGAACGACAGCGGAAGGCCAGGACGG 191
BSNT_01590___ 192 CCAGACACCCGTTTCAGAAGTGATGTCAACAGAACTCGTATCAGGAAACC 241
.||||||||.||||||.|.||.|||.|||||.|..|.||.||||||||.|
BL03170___yhc 192 ACAGACACCTGTTTCAAACGTCATGACAACAAATGTTGTTTCAGGAAATC 241
BSNT_01590___ 242 CTAATATGAGTCTGGAAGACGCGTCGCAGCTGATGGCCCAGCACCAAATC 291
|.||.|||||.||.|||||.||.||.|||||||||||.||...|||||||
BL03170___yhc 242 CGAACATGAGCCTTGAAGAAGCATCACAGCTGATGGCTCAAAGCCAAATC 291
BSNT_01590___ 292 CGCCGCCTTCCTATTGTAGATCAAAACAATCTAGTCGGGATCGTTGCGCT 341
|||||.||.||.||.||.||..|.|||.||.|||||||.||..|.|||||
BL03170___yhc 292 CGCCGTCTCCCGATCGTCGAAAACAACCATTTAGTCGGCATTTTGGCGCT 341
BSNT_01590___ 342 TGGAGACCTGGCAGTCAATCAGATGTCGAACGAGTCTGCGGGATCA-GCG 390
.||.||.|||||.||.||..|..||||.||.||.|||||.||| || |||
BL03170___yhc 342 CGGGGATCTGGCGGTAAACGAATTGTCCAATGAATCTGCCGGA-CAGGCG 390
BSNT_01590___ 391 CTGACAAACATTTCTCA--CCAAAAC--ATTCATTAA 423
||..|.|||||||| || ||...|| |.|||.|||
BL03170___yhc 391 CTTGCGAACATTTC-CACTCCGGCACGGACTCAGTAA 426
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