Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01539 and BL03162
See
Amino acid alignment /
Visit
BSNT_01539 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence dna-align/BSNT_01539___cspB.1.5803.seq
# -bsequence dna-align/BL03162___cspB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01539___cspB-BL03162___cspB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01539___cspB-BL03162___cspB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01539___cspB
# 2: BL03162___cspB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 191/204 (93.6%)
# Similarity: 191/204 (93.6%)
# Gaps: 3/204 ( 1.5%)
# Score: 904.0
#
#
#=======================================
BSNT_01539___ 1 ATGTTAGAAGGTAAAGTAAAATGGTTCAACTCTGAAAAAGGTTTCGGATT 50
|||.||||||||||||||||||||||.|||||||||||||||||||||||
BL03162___csp 1 ATGCTAGAAGGTAAAGTAAAATGGTTTAACTCTGAAAAAGGTTTCGGATT 50
BSNT_01539___ 51 CATCGAAGTAGAAGGTCAAGACGATGTATTCGTTCATTTCTCTGCTATTC 100
|||||||||.|||||.||||||||||||||||||||||||||||||||||
BL03162___csp 51 CATCGAAGTTGAAGGACAAGACGATGTATTCGTTCATTTCTCTGCTATTC 100
BSNT_01539___ 101 AAGGCGAAGGCTTCAAAACTTTAGAAGAAGGCCAAGCTGTTTCTTTTGAA 150
||||||||||||||||||||||.||||||||||||.||||.|||||.|||
BL03162___csp 101 AAGGCGAAGGCTTCAAAACTTTGGAAGAAGGCCAATCTGTATCTTTCGAA 150
BSNT_01539___ 151 ATCGTTGAAGGAAACCGCGGACCACAAGCTGCTAACGTTACTAAAGAAGC 200
||||||||||||||||||||||||||||||||||||||.|| |.||||
BL03162___csp 151 ATCGTTGAAGGAAACCGCGGACCACAAGCTGCTAACGTAAC---AAAAGC 197
BSNT_01539___ 201 GTAA 204
||||
BL03162___csp 198 GTAA 201
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.