Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01539 and BL03162

See Amino acid alignment / Visit BSNT_01539 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:01
# Commandline: needle
#    -asequence dna-align/BSNT_01539___cspB.1.5803.seq
#    -bsequence dna-align/BL03162___cspB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01539___cspB-BL03162___cspB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01539___cspB-BL03162___cspB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01539___cspB
# 2: BL03162___cspB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity:     191/204 (93.6%)
# Similarity:   191/204 (93.6%)
# Gaps:           3/204 ( 1.5%)
# Score: 904.0
# 
#
#=======================================

BSNT_01539___      1 ATGTTAGAAGGTAAAGTAAAATGGTTCAACTCTGAAAAAGGTTTCGGATT     50
                     |||.||||||||||||||||||||||.|||||||||||||||||||||||
BL03162___csp      1 ATGCTAGAAGGTAAAGTAAAATGGTTTAACTCTGAAAAAGGTTTCGGATT     50

BSNT_01539___     51 CATCGAAGTAGAAGGTCAAGACGATGTATTCGTTCATTTCTCTGCTATTC    100
                     |||||||||.|||||.||||||||||||||||||||||||||||||||||
BL03162___csp     51 CATCGAAGTTGAAGGACAAGACGATGTATTCGTTCATTTCTCTGCTATTC    100

BSNT_01539___    101 AAGGCGAAGGCTTCAAAACTTTAGAAGAAGGCCAAGCTGTTTCTTTTGAA    150
                     ||||||||||||||||||||||.||||||||||||.||||.|||||.|||
BL03162___csp    101 AAGGCGAAGGCTTCAAAACTTTGGAAGAAGGCCAATCTGTATCTTTCGAA    150

BSNT_01539___    151 ATCGTTGAAGGAAACCGCGGACCACAAGCTGCTAACGTTACTAAAGAAGC    200
                     ||||||||||||||||||||||||||||||||||||||.||   |.||||
BL03162___csp    151 ATCGTTGAAGGAAACCGCGGACCACAAGCTGCTAACGTAAC---AAAAGC    197

BSNT_01539___    201 GTAA    204
                     ||||
BL03162___csp    198 GTAA    201


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