Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04764 and BL03152

See Amino acid alignment / Visit BSNT_04764 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence dna-align/BSNT_04764___yuzB.1.5803.seq
#    -bsequence dna-align/BL03152___yuzB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04764___yuzB-BL03152___yuzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04764___yuzB-BL03152___yuzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04764___yuzB
# 2: BL03152___yuzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     175/245 (71.4%)
# Similarity:   175/245 (71.4%)
# Gaps:          16/245 ( 6.5%)
# Score: 603.5
# 
#
#=======================================

BSNT_04764___      1 ATGAATCCAATGATTGAATTTTGTGTCAGCAATCTGGCTCACGGCTCTCA     50
                     .||..||||||..||||.|||||.|||||||||||.||.||.||.|||||
BL03152___yuz      1 GTGTTTCCAATCGTTGAGTTTTGCGTCAGCAATCTTGCCCAAGGTTCTCA     50

BSNT_04764___     51 GGAAGCCCGGGCGATTTTGGAGAAGGATCCCAACCTTGATGTCCTTGAAT    100
                     |||.||...||..||.||||||||.|||||.||..|.||||||.||||||
BL03152___yuz     51 GGAGGCAAAGGAAATATTGGAGAAAGATCCGAATTTGGATGTCGTTGAAT    100

BSNT_04764___    101 ATGGCTGCTTAAGCTACTGCGGGAC-ATGCATGGAATCGCTTTTCGCTCT    149
                     |.||||||.|.||.|||||| |||| |||||||.|..||.|.|..|||||
BL03152___yuz    101 ACGGCTGCCTGAGTTACTGC-GGACAATGCATGCAGACGATGTATGCTCT    149

BSNT_04764___    150 GGTAAACGGAGAAGTCGTCATGGGTGA-AACG------CCTGCTGAGCTT    192
                     .||||||||||||.|       ||||| |.||      ||.|||||..|.
BL03152___yuz    150 TGTAAACGGAGAAAT-------GGTGACAGCGAATAATCCGGCTGAATTG    192

BSNT_04764___    193 GTTGAGAATATATATACCTTTATTGAAGAAAATCCAATGTTTTAA    237
                     ||.||.||||||||.|..||.|||||.||||||..|.|..|||||
BL03152___yuz    193 GTCGAAAATATATACAAGTTCATTGATGAAAATGAACTCATTTAA    237


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