Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04761 and BL03151
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_04761___yutK.1.5803.seq
# -bsequence dna-align/BL03151___yutK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04761___yutK-BL03151___yutK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04761___yutK-BL03151___yutK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04761___yutK
# 2: BL03151___yutK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1269
# Identity: 890/1269 (70.1%)
# Similarity: 890/1269 (70.1%)
# Gaps: 105/1269 ( 8.3%)
# Score: 3054.5
#
#
#=======================================
BSNT_04761___ 1 ATGAATGTTCTGTGGGGGCTGCTGGG----CGCAGTTGCGATCATTGCTA 46
|||||..||.|.|||||.||.||.|| | |.|||||..|.||.|
BL03151___yut 1 ATGAACATTTTATGGGGACTTCTTGGTATTC----TGGCGATTTTCGCGA 46
BSNT_04761___ 47 TCGCGTTTTTATTTTCAGAAAAGAAAAGCAATATTAAGATAAGAACCG-- 94
|.||.||..|..||||.||..|.||.|||||.|||||.||||||| ||
BL03151___yut 47 TTGCTTTCCTGCTTTCCGAGCATAAGAGCAAAATTAACATAAGAA-CGAT 95
BSNT_04761___ 95 --TCATCGTTGGTTT----ATGCACACAGGTGGC----GTTTGGATACAT 134
|.||| ||||| ||.|| || |||.||||.|||
BL03151___yut 96 TTTAATC---GGTTTGGCGATCCA--------GCTCCTGTTCGGATTCAT 134
BSNT_04761___ 135 CGTGTTGAAATGGGAA-----GCGGGACGCGCTGTTTTTTTATGGTTTTC 179
|||..|.||||||||| |.||||.||| |||.|.||||||.|
BL03151___yut 135 CGTTCTCAAATGGGAAACGGGGAGGGAAGCG-----TTTCTTTGGTTTAC 179
BSNT_04761___ 180 --AAGCCGTGTACAGCTTCTGATTGACTATGCGAATGAAGGCATCAGTTT 227
||||| ||.||||.|||..|..|.||||||||||||||||||||.||
BL03151___yut 180 AAAAGCC--GTTCAGCATCTCGTCAATTATGCGAATGAAGGCATCAGCTT 227
BSNT_04761___ 228 TATTTTTGGACCGCTTCTAAAGGTCGGAGACAGTCCGGCATTTGCATTAA 277
|.|.||.||.||.||..||.|.||.||.||||||.|.||.|||||.||||
BL03151___yut 228 TCTCTTCGGGCCTCTCTTACAAGTAGGCGACAGTGCTGCCTTTGCTTTAA 277
BSNT_04761___ 278 GTGTACTGCCCGTTATCATTTTCTTCTCAGCACTGATTGCAGTTTTATAT 327
|.||.||.||.||||||||.|||||.|||.|.||||||||||||.|.||.
BL03151___yut 278 GCGTTCTTCCTGTTATCATCTTCTTTTCATCTCTGATTGCAGTTCTTTAC 327
BSNT_04761___ 328 CATTTGAAAATCATGCAGCTCGTTTTCCGTGTCATTGGCGGCGGATTGTC 377
|||||.|.|||||||||..|..|..||||..||||.||||||||||||.|
BL03151___yut 328 CATTTAAGAATCATGCAAGTGATCATCCGCTTCATCGGCGGCGGATTGGC 377
BSNT_04761___ 378 GAAGCTCCTTGGAACAAGCAAAACGGAATCTCTGGCGGCTGCTGCCAATA 427
.||.||.||.|||||||||||||||||||||||..|.||.||||||||||
BL03151___yut 378 AAAACTGCTCGGAACAAGCAAAACGGAATCTCTTTCTGCAGCTGCCAATA 427
BSNT_04761___ 428 TTTTTGTAGGACAATCAGAATCTCCGTTAGTGATCAAACCCCTGATTGCC 477
|.|||||.||.|||.|.||..|.|||.|.||.||.||.||..|.||
BL03151___yut 428 TCTTTGTCGGGCAAACTGAGGCGCCGCTTGTAATTAAGCCGTTTAT---- 473
BSNT_04761___ 478 GGGCTGACGCGC-------------TCTGAGTTGTTTACGATTATGACGA 514
||| ||.|||.|||||.|..|||||||..
BL03151___yut 474 ---------CGCAAACTTAACAAAGTCAGAGCTGTTTGCCGTTATGACAG 514
BSNT_04761___ 515 GCGGTCTATCGGCAGTTGCGGGATCTACCTTGTTTGGGTACGCGCTTCTT 564
||||.||..|..||||.||.||.|||...|||||.||.|||||.|||||.
BL03151___yut 515 GCGGACTCGCTTCAGTGGCCGGTTCTGTTTTGTTCGGTTACGCCCTTCTC 564
BSNT_04761___ 565 GGTATTCCGATTGAATATTTGCTGGCGGCCAGCTTTATGGCTGCTCCAGC 614
||..||||..|.|||||||||||.||.||.|||||||||||.||.||.||
BL03151___yut 565 GGGGTTCCTCTCGAATATTTGCTTGCAGCGAGCTTTATGGCCGCACCTGC 614
BSNT_04761___ 615 TGGACTAGTCTTTGG-TAAATTGATTATACCCGAAACGGAAAAAACGCAA 663
||.||.|..|.||| .|||.||.|.||.|||||||||||||||.||.||
BL03151___yut 615 -GGGCTTGATTATGGCAAAAATGCTCATTCCCGAAACGGAAAAACCGAAA 663
BSNT_04761___ 664 ACCGTAAAAAGCGAT-TTCAAAATGGATGAAGGCGAAGGCGCAGCCAATG 712
|..|.|.|||..||| ||| ||||||.|||||.|||||.||||||.||||
BL03151___yut 664 ATTGAAGAAAAAGATATTC-AAATGGCTGAAGACGAAGACGCAGCAAATG 712
BSNT_04761___ 713 TCATTGACGCAGCTGCAAAGGGAGCGTCAACAGGACTGCAAATTGCGTTA 762
||||.||.||.||.|||||.||.||.|||||.||.||.....|||||||.
BL03151___yut 713 TCATCGATGCCGCGGCAAAAGGGGCATCAACGGGTCTCTCTCTTGCGTTG 762
BSNT_04761___ 763 AACGTTGGGGCGATGCTGCTTGCGTTTGTTGCGTTAATCGCTGTAGTAAA 812
||.||.||.||||||||||||||.||||||||.||.||.||.||..||||
BL03151___yut 763 AATGTCGGCGCGATGCTGCTTGCTTTTGTTGCTTTGATTGCCGTTTTAAA 812
BSNT_04761___ 813 CGGTATTCTCGGCGGGGCTTTCGGC---TTGTTCGGTTTAAAAGGCGTAA 859
|||.|||||.||.||.| ||||| |.||||||.||.||||.|.|..
BL03151___yut 813 CGGAATTCTTGGAGGAG---TCGGCGGATGGTTCGGCTTTAAAGACCTTT 859
BSNT_04761___ 860 CATTAGAATCCATTCTCGGTTATGTGTTTTCTCCTATCGCCTTTTTGATT 909
||.|.||||..||||||||.|||||.|||.|.||..||||||||.|.||.
BL03151___yut 860 CACTCGAATATATTCTCGGCTATGTATTTGCCCCGCTCGCCTTTGTCATC 909
BSNT_04761___ 910 GGCGTGCCTTGGCATGAAGCATTGCAGGCGGGAAGCTATATCGGTCAGAA 959
||||||||.|||.|||||||..|.|||||.|||||||.|||||||||.||
BL03151___yut 910 GGCGTGCCATGGGATGAAGCGGTCCAGGCCGGAAGCTTTATCGGTCAAAA 959
BSNT_04761___ 960 ATTGGTGCTGAATGAGTTTGTCGCTTATTCTAACTTCGGTCCGCACATCG 1009
..|.||.|||||.||.||||||||||||||.||.||.|.|||| ||
BL03151___yut 960 GCTCGTTCTGAACGAATTTGTCGCTTATTCCAATTTTGCTCCG---AT-- 1004
BSNT_04761___ 1010 GCGAGTTTTCTAAG---------AAAACTGCTACCATTATCAGTTTCGCG 1050
||||..|.|| |||||.|||.|.||||||||.||.|||
BL03151___yut 1005 ----GTTTGATCAGCTTTCCGTCAAAACAGCTTCGATTATCAGCTTTGCG 1050
BSNT_04761___ 1051 TTATGCGGATTCGCCAATTTTTCATCAATTGCGATTATGCTTGGTACG-C 1099
.|.|||||.|||||.||.||.||.||..|.||||||.||||||| |.| |
BL03151___yut 1051 CTGTGCGGTTTCGCAAACTTGTCTTCTGTGGCGATTTTGCTTGG-AGGAC 1099
BSNT_04761___ 1100 TGGGCGGATTAGCACCCAGCCGCCGTTCAGATATCGCGCGTCTCGGCCTG 1149
|.||.|||.|.||.||.|.|||||||||.||||||||.|||||||||.||
BL03151___yut 1100 TTGGAGGAATGGCGCCGAACCGCCGTTCCGATATCGCCCGTCTCGGCTTG 1149
BSNT_04761___ 1150 AAGGCTGTTCTTGCAGGAACATTAGCCAATCTGCTCAGCGCAGCCATTGC 1199
||.||.|||...||.||||||||.|||||.||..|.|||||.||.||.||
BL03151___yut 1150 AAAGCCGTTGCGGCCGGAACATTGGCCAACCTTTTAAGCGCGGCGATCGC 1199
BSNT_04761___ 1200 CGGCATGTTTAT---ATAA 1215
|||.|||||||| ||||
BL03151___yut 1200 CGGAATGTTTATCGGATAA 1218
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