Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04761 and BL03151

See Amino acid alignment / Visit BSNT_04761 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence dna-align/BSNT_04761___yutK.1.5803.seq
#    -bsequence dna-align/BL03151___yutK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04761___yutK-BL03151___yutK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04761___yutK-BL03151___yutK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04761___yutK
# 2: BL03151___yutK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1269
# Identity:     890/1269 (70.1%)
# Similarity:   890/1269 (70.1%)
# Gaps:         105/1269 ( 8.3%)
# Score: 3054.5
# 
#
#=======================================

BSNT_04761___      1 ATGAATGTTCTGTGGGGGCTGCTGGG----CGCAGTTGCGATCATTGCTA     46
                     |||||..||.|.|||||.||.||.||    |    |.|||||..|.||.|
BL03151___yut      1 ATGAACATTTTATGGGGACTTCTTGGTATTC----TGGCGATTTTCGCGA     46

BSNT_04761___     47 TCGCGTTTTTATTTTCAGAAAAGAAAAGCAATATTAAGATAAGAACCG--     94
                     |.||.||..|..||||.||..|.||.|||||.|||||.||||||| ||  
BL03151___yut     47 TTGCTTTCCTGCTTTCCGAGCATAAGAGCAAAATTAACATAAGAA-CGAT     95

BSNT_04761___     95 --TCATCGTTGGTTT----ATGCACACAGGTGGC----GTTTGGATACAT    134
                       |.|||   |||||    ||.||        ||    |||.||||.|||
BL03151___yut     96 TTTAATC---GGTTTGGCGATCCA--------GCTCCTGTTCGGATTCAT    134

BSNT_04761___    135 CGTGTTGAAATGGGAA-----GCGGGACGCGCTGTTTTTTTATGGTTTTC    179
                     |||..|.|||||||||     |.||||.|||     |||.|.||||||.|
BL03151___yut    135 CGTTCTCAAATGGGAAACGGGGAGGGAAGCG-----TTTCTTTGGTTTAC    179

BSNT_04761___    180 --AAGCCGTGTACAGCTTCTGATTGACTATGCGAATGAAGGCATCAGTTT    227
                       |||||  ||.||||.|||..|..|.||||||||||||||||||||.||
BL03151___yut    180 AAAAGCC--GTTCAGCATCTCGTCAATTATGCGAATGAAGGCATCAGCTT    227

BSNT_04761___    228 TATTTTTGGACCGCTTCTAAAGGTCGGAGACAGTCCGGCATTTGCATTAA    277
                     |.|.||.||.||.||..||.|.||.||.||||||.|.||.|||||.||||
BL03151___yut    228 TCTCTTCGGGCCTCTCTTACAAGTAGGCGACAGTGCTGCCTTTGCTTTAA    277

BSNT_04761___    278 GTGTACTGCCCGTTATCATTTTCTTCTCAGCACTGATTGCAGTTTTATAT    327
                     |.||.||.||.||||||||.|||||.|||.|.||||||||||||.|.||.
BL03151___yut    278 GCGTTCTTCCTGTTATCATCTTCTTTTCATCTCTGATTGCAGTTCTTTAC    327

BSNT_04761___    328 CATTTGAAAATCATGCAGCTCGTTTTCCGTGTCATTGGCGGCGGATTGTC    377
                     |||||.|.|||||||||..|..|..||||..||||.||||||||||||.|
BL03151___yut    328 CATTTAAGAATCATGCAAGTGATCATCCGCTTCATCGGCGGCGGATTGGC    377

BSNT_04761___    378 GAAGCTCCTTGGAACAAGCAAAACGGAATCTCTGGCGGCTGCTGCCAATA    427
                     .||.||.||.|||||||||||||||||||||||..|.||.||||||||||
BL03151___yut    378 AAAACTGCTCGGAACAAGCAAAACGGAATCTCTTTCTGCAGCTGCCAATA    427

BSNT_04761___    428 TTTTTGTAGGACAATCAGAATCTCCGTTAGTGATCAAACCCCTGATTGCC    477
                     |.|||||.||.|||.|.||..|.|||.|.||.||.||.||..|.||    
BL03151___yut    428 TCTTTGTCGGGCAAACTGAGGCGCCGCTTGTAATTAAGCCGTTTAT----    473

BSNT_04761___    478 GGGCTGACGCGC-------------TCTGAGTTGTTTACGATTATGACGA    514
                              |||             ||.|||.|||||.|..|||||||..
BL03151___yut    474 ---------CGCAAACTTAACAAAGTCAGAGCTGTTTGCCGTTATGACAG    514

BSNT_04761___    515 GCGGTCTATCGGCAGTTGCGGGATCTACCTTGTTTGGGTACGCGCTTCTT    564
                     ||||.||..|..||||.||.||.|||...|||||.||.|||||.|||||.
BL03151___yut    515 GCGGACTCGCTTCAGTGGCCGGTTCTGTTTTGTTCGGTTACGCCCTTCTC    564

BSNT_04761___    565 GGTATTCCGATTGAATATTTGCTGGCGGCCAGCTTTATGGCTGCTCCAGC    614
                     ||..||||..|.|||||||||||.||.||.|||||||||||.||.||.||
BL03151___yut    565 GGGGTTCCTCTCGAATATTTGCTTGCAGCGAGCTTTATGGCCGCACCTGC    614

BSNT_04761___    615 TGGACTAGTCTTTGG-TAAATTGATTATACCCGAAACGGAAAAAACGCAA    663
                      ||.||.|..|.||| .|||.||.|.||.|||||||||||||||.||.||
BL03151___yut    615 -GGGCTTGATTATGGCAAAAATGCTCATTCCCGAAACGGAAAAACCGAAA    663

BSNT_04761___    664 ACCGTAAAAAGCGAT-TTCAAAATGGATGAAGGCGAAGGCGCAGCCAATG    712
                     |..|.|.|||..||| ||| ||||||.|||||.|||||.||||||.||||
BL03151___yut    664 ATTGAAGAAAAAGATATTC-AAATGGCTGAAGACGAAGACGCAGCAAATG    712

BSNT_04761___    713 TCATTGACGCAGCTGCAAAGGGAGCGTCAACAGGACTGCAAATTGCGTTA    762
                     ||||.||.||.||.|||||.||.||.|||||.||.||.....|||||||.
BL03151___yut    713 TCATCGATGCCGCGGCAAAAGGGGCATCAACGGGTCTCTCTCTTGCGTTG    762

BSNT_04761___    763 AACGTTGGGGCGATGCTGCTTGCGTTTGTTGCGTTAATCGCTGTAGTAAA    812
                     ||.||.||.||||||||||||||.||||||||.||.||.||.||..||||
BL03151___yut    763 AATGTCGGCGCGATGCTGCTTGCTTTTGTTGCTTTGATTGCCGTTTTAAA    812

BSNT_04761___    813 CGGTATTCTCGGCGGGGCTTTCGGC---TTGTTCGGTTTAAAAGGCGTAA    859
                     |||.|||||.||.||.|   |||||   |.||||||.||.||||.|.|..
BL03151___yut    813 CGGAATTCTTGGAGGAG---TCGGCGGATGGTTCGGCTTTAAAGACCTTT    859

BSNT_04761___    860 CATTAGAATCCATTCTCGGTTATGTGTTTTCTCCTATCGCCTTTTTGATT    909
                     ||.|.||||..||||||||.|||||.|||.|.||..||||||||.|.||.
BL03151___yut    860 CACTCGAATATATTCTCGGCTATGTATTTGCCCCGCTCGCCTTTGTCATC    909

BSNT_04761___    910 GGCGTGCCTTGGCATGAAGCATTGCAGGCGGGAAGCTATATCGGTCAGAA    959
                     ||||||||.|||.|||||||..|.|||||.|||||||.|||||||||.||
BL03151___yut    910 GGCGTGCCATGGGATGAAGCGGTCCAGGCCGGAAGCTTTATCGGTCAAAA    959

BSNT_04761___    960 ATTGGTGCTGAATGAGTTTGTCGCTTATTCTAACTTCGGTCCGCACATCG   1009
                     ..|.||.|||||.||.||||||||||||||.||.||.|.||||   ||  
BL03151___yut    960 GCTCGTTCTGAACGAATTTGTCGCTTATTCCAATTTTGCTCCG---AT--   1004

BSNT_04761___   1010 GCGAGTTTTCTAAG---------AAAACTGCTACCATTATCAGTTTCGCG   1050
                         ||||..|.||         |||||.|||.|.||||||||.||.|||
BL03151___yut   1005 ----GTTTGATCAGCTTTCCGTCAAAACAGCTTCGATTATCAGCTTTGCG   1050

BSNT_04761___   1051 TTATGCGGATTCGCCAATTTTTCATCAATTGCGATTATGCTTGGTACG-C   1099
                     .|.|||||.|||||.||.||.||.||..|.||||||.||||||| |.| |
BL03151___yut   1051 CTGTGCGGTTTCGCAAACTTGTCTTCTGTGGCGATTTTGCTTGG-AGGAC   1099

BSNT_04761___   1100 TGGGCGGATTAGCACCCAGCCGCCGTTCAGATATCGCGCGTCTCGGCCTG   1149
                     |.||.|||.|.||.||.|.|||||||||.||||||||.|||||||||.||
BL03151___yut   1100 TTGGAGGAATGGCGCCGAACCGCCGTTCCGATATCGCCCGTCTCGGCTTG   1149

BSNT_04761___   1150 AAGGCTGTTCTTGCAGGAACATTAGCCAATCTGCTCAGCGCAGCCATTGC   1199
                     ||.||.|||...||.||||||||.|||||.||..|.|||||.||.||.||
BL03151___yut   1150 AAAGCCGTTGCGGCCGGAACATTGGCCAACCTTTTAAGCGCGGCGATCGC   1199

BSNT_04761___   1200 CGGCATGTTTAT---ATAA   1215
                     |||.||||||||   ||||
BL03151___yut   1200 CGGAATGTTTATCGGATAA   1218


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