Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04759 and BL03150

See Amino acid alignment / Visit BSNT_04759 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence dna-align/BSNT_04759___dapF.1.5803.seq
#    -bsequence dna-align/BL03150___dapF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04759___dapF-BL03150___dapF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04759___dapF-BL03150___dapF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04759___dapF
# 2: BL03150___dapF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 888
# Identity:     641/888 (72.2%)
# Similarity:   641/888 (72.2%)
# Gaps:          63/888 ( 7.1%)
# Score: 2247.5
# 
#
#=======================================

BSNT_04759___      1 ATGAACTCATTTCGATTTACCAAAATGCACGGCCTGGGAAACAGTTATAT     50
                     |||||.||.|||||.|||||.||||||||||||.|.||||||||.|||||
BL03150___dap      1 ATGAATTCTTTTCGTTTTACTAAAATGCACGGCTTAGGAAACAGCTATAT     50

BSNT_04759___     51 TTATGTGAATCAATTTGAAGAACAGCTTCCAGAAGAAAAACTGTCAGAGA    100
                     .||.||.|||||.|||||||||||.||.||.||.||.....||||.||..
BL03150___dap     51 ATACGTCAATCAGTTTGAAGAACATCTCCCTGAGGAGCTGTTGTCGGATT    100

BSNT_04759___    101 TTGCAATTCAGGTTTCTTCTGTTTATACAGGGATCGGATCCGACGGAATG    150
                     |.||..|..|.||.|||||.|||||.||.||.|||||.||.|||||||||
BL03150___dap    101 TGGCCGTCAAAGTGTCTTCCGTTTACACCGGAATCGGTTCAGACGGAATG    150

BSNT_04759___    151 ATCCTGATATGCCCATCAGACCAAGCGCCTGTTAAAATGCGGATTTTTAA    200
                     ||.||.||.||.||.|||||.|.||||||.|||||||||||||||||.||
BL03150___dap    151 ATTCTCATCTGTCCTTCAGATCGAGCGCCGGTTAAAATGCGGATTTTCAA    200

BSNT_04759___    201 TAATGACGGATCTGAAGGGAAAAACTGCGGCAACGGCCTGCGCTGCGTCG    250
                     .|..||||||||||||||.|||||||||||.|||||..||||||||||.|
BL03150___dap    201 CAGCGACGGATCTGAAGGCAAAAACTGCGGAAACGGTTTGCGCTGCGTTG    250

BSNT_04759___    251 CAAAATACGCATATGAGCATAAGCTGGTTGAGGAAACATCTTTTCTGATT    300
                     ||||||||||.|||||.|||||.|||||.||||||||.||.|||.|.|||
BL03150___dap    251 CAAAATACGCGTATGAACATAAACTGGTAGAGGAAACGTCCTTTTTAATT    300

BSNT_04759___    301 GAAACTCTCTCCGGGCTT-GTGAAAGCGGAGGTTCAAGTCGAAAACGGAA    349
                     |||||.|| |.|.||||| ||.||.||..|||||.|.||.||..|.||||
BL03150___dap    301 GAAACCCT-TTCAGGCTTGGTAAAGGCTCAGGTTGAGGTGGATGAAGGAA    349

BSNT_04759___    350 AAGTGAATGT---GGTCACTGTCGATATGGGCGAACCGCG-CTTGACAAA    395
                     ||||   |||   ||..||.|||||||||||||||||||| |||..| ||
BL03150___dap    350 AAGT---TGTATCGGCTACGGTCGATATGGGCGAACCGCGACTTCTC-AA    395

BSNT_04759___    396 ATCCGAGCTCCCGATGCTTGACGGCGGGGAAGAG------CACACAATCA    439
                     |||.||..|.|||||||      |.||.|||.||      .|.||.||||
BL03150___dap    396 ATCAGATATGCCGATGC------GGGGTGAACAGGGTTCAGAGACGATCA    439

BSNT_04759___    440 ATGAAACGATGGCATTTG------GTGAAGTAGAACTAACAGGCACTGCC    483
                     ||||||.||||..|||.|      |||||.| |||     .||.||.||.
BL03150___dap    440 ATGAAAAGATGATATTCGGCGGCCGTGAAAT-GAA-----GGGTACCGCT    483

BSNT_04759___    484 GTTTCAATGGGAAATCCGCATATCGTTTTT-------CCGATCGCAGACA    526
                     ||.||.|||||.|||||.||.|||||.|||       .||||       |
BL03150___dap    484 GTATCCATGGGCAATCCCCACATCGTCTTTTATTTAGACGAT-------A    526

BSNT_04759___    527 TTGAACAGGCACCCTTAACGACACTGGGGCCGGTGATTGAGAAAGATCCG    576
                     |||||.|.||.||..|.|||||..||||.|||.|.|||||.||||||...
BL03150___dap    527 TTGAAAAAGCCCCGCTGACGACGATGGGACCGCTCATTGAAAAAGATGAA    576

BSNT_04759___    577 AGATTTCCGGAAGGCATCAATGTGGAATTCGTTGAAACCGTGAATGAACA    626
                     ||.|||||||||||..|.|||||.|||||.||||||...|..||.|||.|
BL03150___dap    577 AGGTTTCCGGAAGGGGTTAATGTAGAATTTGTTGAAGTTGAAAACGAAAA    626

BSNT_04759___    627 AGAATTGCATTTCCGCGTCTGGGAACGGGGATCAGGGATTACTCAGGCAT    676
                     .|||.|.|||||||||||.||||||.||||||||||.|||||.|||||.|
BL03150___dap    627 TGAACTCCATTTCCGCGTATGGGAAAGGGGATCAGGAATTACCCAGGCTT    676

BSNT_04759___    677 GCGGGACAGGAGCATGTGCAGCGGCAGTCGCATCTGTATTAAACGGCGTA    726
                     ||||.|||||.||.||.|||||.|||||....||.||..|.|||||| ||
BL03150___dap    677 GCGGAACAGGCGCCTGCGCAGCCGCAGTGAGTTCGGTGCTCAACGGC-TA    725

BSNT_04759___    727 T--CAAA-GCGAAATCA-AGACATCACGGTGCATTTAGCAGGCGGGGATT    772
                     |  |||| |.||   || .|||||.||.||.|||.|.||.|||||.||||
BL03150___dap    726 TTCCAAACGGGA---CACGGACATTACCGTCCATCTCGCCGGCGGCGATT    772

BSNT_04759___    773 TGGTGATAAACTGGAAAGATAACGGCCATGTAATGATGACAGGGCCGGCT    822
                     ||.|.||.||.||||||.|..||||.|..||.||||||||.||.||.|||
BL03150___dap    773 TGATCATTAATTGGAAAAACGACGGACGCGTCATGATGACGGGACCCGCT    822

BSNT_04759___    823 GAAACCGTTTGTGAGGG-----TGTCTATTTCTTGTAA    855
                     |||||.||.|||||.||     |.|.|||.||  .|||
BL03150___dap    823 GAAACGGTATGTGAAGGCGAGTTTTTTATATC--ATAA    858


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04759 and BL03150

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
