Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04723 and BL03146
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_04723___yumB.1.5803.seq
# -bsequence dna-align/BL03146___yumB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04723___yumB-BL03146___yumB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04723___yumB-BL03146___yumB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04723___yumB
# 2: BL03146___yumB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1298
# Identity: 896/1298 (69.0%)
# Similarity: 896/1298 (69.0%)
# Gaps: 124/1298 ( 9.6%)
# Score: 3091.0
#
#
#=======================================
BSNT_04723___ 1 ATGGGTCTAACAAAAGCAAAAAAAGAGAAGGTGGATGTGATGGCATTGAA 50
|||||
BL03146___yum 1 ---------------------------------------------TTGAA 5
BSNT_04723___ 51 TAAGCCCAAAATCGTGATTTTAGGTGCAGGATATGGCGGATTGATGACGG 100
||||||.|||.|.||..|.|||||||||||.|||||.|||||.|||||.|
BL03146___yum 6 TAAGCCAAAAGTAGTAGTATTAGGTGCAGGTTATGGTGGATTAATGACCG 55
BSNT_04723___ 101 TGACAAGGCTGACGAAGTATGTCGGGCCGAATGATGCTGACATTACGCTT 150
|.||.||.||....||..|..||||....|||||.||.||.|||||||||
BL03146___yum 56 TTACGAGACTTGTTAAAAAAATCGGCATCAATGAAGCGGATATTACGCTT 105
BSNT_04723___ 151 GTAAATAAACACAATTATCATTATGAAACGACATGGATGCATGAAGCGAG 200
||.||.||.||||||||.||||||||.|||||.||||||||.||.|||||
BL03146___yum 106 GTCAACAAGCACAATTACCATTATGAGACGACCTGGATGCACGAGGCGAG 155
BSNT_04723___ 201 CGCGGGTACGCTCCATCATGACCGCTGCCGTTATCAGATAAAAGATGTAA 250
|||.||||||||.|||||||||.|.|||||.||||||||.|||||.||.|
BL03146___yum 156 CGCAGGTACGCTTCATCATGACAGATGCCGCTATCAGATTAAAGACGTCA 205
BSNT_04723___ 251 TCAA-CCAGTCACGGGTGAATTTTGTACAGGATACCGTAAAGGCAATCAA 299
|||| .|| ||.||.||.|||||.||.||||||||.|||||| ||
BL03146___yum 206 TCAATACA-TCCCGTGTCAATTTCGTTCAGGATACGGTAAAG------AA 248
BSNT_04723___ 300 AATTGAT-------GATAAAAAAGTTGTGCTTGCGAATGGGGAACTGCAG 342
|||.||| || ||.|||||.||.||||..|..||.||.|| .||
BL03146___yum 249 AATCGATAAAGAAGGA-AAGAAAGTCGTCCTTGAAACAGGAGAGCT-TAG 296
BSNT_04723___ 343 -TACGATTATTTAGTCATCGGGCTCGGCGCCGTGCCTGAAACGTTCGGCA 391
|||||.|||.|.|||.|.|.|||||||.||||.||||||||.|||||.|
BL03146___yum 297 TTACGACTATCTTGTCGTGGCGCTCGGCTCCGTCCCTGAAACTTTCGGAA 346
BSNT_04723___ 392 TTAAAGGCTTAAAAGAATATGCGTTTC-CGATTGCCAACATCAACACGTC 440
||...||.||.|||||..|||| |||| |.|||.|.||||||||..||||
BL03146___yum 347 TTTCGGGATTGAAAGAGCATGC-TTTCTCTATTTCAAACATCAATTCGTC 395
BSNT_04723___ 441 GCGCCTGCTGCGGGAACATATTGAGCTGCAGTTTGCGACTTACAATACGG 490
.||||.|||.||.||.||.|||||....|||||.|||||.||.||.||.|
BL03146___yum 396 CCGCCAGCTTCGCGAGCACATTGAATATCAGTTCGCGACGTATAACACAG 445
BSNT_04723___ 491 AAGCGGAAAAACGGCCGGACAGGTTAACGATCGTTGTTGGCGGTGCCGGA 540
||||.||.||.||.|||||..|..|.|||||||||||.||.||.||.||.
BL03146___yum 446 AAGCCGAGAAGCGCCCGGAACGCCTGACGATCGTTGTCGGGGGAGCTGGT 495
BSNT_04723___ 541 TTTACGGGAATTGAATTTCTTGGCGAACTGGCTGCTCGCGTGCCGGAGCT 590
|||||.||.|||||||||.|.||.|||.||||....|||.|.||.|||||
BL03146___yum 496 TTTACAGGCATTGAATTTTTAGGTGAAATGGCCAACCGCATTCCTGAGCT 545
BSNT_04723___ 591 CTGTAAGGAATATGACGTTGA----CAGAAGCCTTGTCCGCATCATTTGT 636
.||....|||||.||..|.|| |||.|| ||.||..|.|||||.
BL03146___yum 546 GTGCCGCGAATACGATATCGACCGCCAGCAG----GTTCGTTTAATTTGC 591
BSNT_04723___ 637 GTGGAAGCAGCGCCGACCGTTTTGCCGGGCTTTGATCCGGAACTTGTTGA 686
||||||||.||||||.|.|||.|.|||||||||||.|||||.|||||.||
BL03146___yum 592 GTGGAAGCCGCGCCGTCTGTTCTCCCGGGCTTTGAACCGGAGCTTGTCGA 641
BSNT_04723___ 687 TTACGCCGTACATTATCTTG-AGGAAAACGGAGTTGAGTTCAAGATCGGC 735
|||.||.||..|.||.||.| ||||||| ||.|||||.|||||.||||||
BL03146___yum 642 TTATGCGGTCAACTACCTCGAAGGAAAA-GGCGTTGAATTCAAAATCGGC 690
BSNT_04723___ 736 ACGGCTGTACAAGAATGTACCCCGGAAGGAGTCAGAGTCGGCAAAAAAGA 785
|||||.||..|||||||.||.||.||.|||.|||..|||||.|||.|.||
BL03146___yum 691 ACGGCCGTGAAAGAATGCACGCCTGACGGAATCATCGTCGGAAAAGACGA 740
BSNT_04723___ 786 TGAGGAACCAGAGCAGATCAAATCGCA--AACCGTTGTTTGGGCGGCAGG 833
|.|| ||| ||..|.|||||| ||| .||.||.||.|||||.|||||
BL03146___yum 741 TCAG--ACC-GAAGAAATCAAA--GCAGGCACTGTCGTATGGGCCGCAGG 785
BSNT_04723___ 834 TGTCCGCGGCCATCCGATTGTAGAGGAAGCCGGTTTTGAAAATATGCGCG 883
.|||||||||.|.|||||..|.||||||.||||.||||||||.|||||||
BL03146___yum 786 CGTCCGCGGCAACCCGATCATTGAGGAATCCGGCTTTGAAAACATGCGCG 835
BSNT_04723___ 884 GCCGGGTGAAAGTCAACCCTGATCTTCGCGCCCCAGGACATGACAATGTC 933
||||.|||||.||.||.|||||.||.||||....|||.|||||..||.|.
BL03146___yum 836 GCCGTGTGAAGGTTAAACCTGACCTGCGCGTTGAAGGCCATGATGATATA 885
BSNT_04723___ 934 TTTATTCTCGGCGACAGCTCGCTGTTT----ATGAATGAAGATACAGAGC 979
|||.||.||||.|||.|||| ||| ||.||||||||.||.||..
BL03146___yum 886 TTTGTTATCGGAGACTGCTC----TTTAATCATAAATGAAGAAACCGAAA 931
BSNT_04723___ 980 GTCCGTATCCGCCGACTGCGCAAATTGCAATGCAGCAGGGCATAACGGTC 1029
|.||.|||||||||||||||||.|||.|.||||||||.|||..||||..|
BL03146___yum 932 GGCCTTATCCGCCGACTGCGCAGATTTCCATGCAGCAAGGCGAAACGTGC 981
BSNT_04723___ 1030 GCTAAAAACCTTG--GCAGGCTTATTAAGGGCGGAGAGCTTGAGGAATTC 1077
||.||.||.||.| ||| ||.|||.|.|||..|||
BL03146___yum 982 GCAAACAATCTGGCCGCA--CTGATTCACGGCAAAGA------------- 1016
BSNT_04723___ 1078 AAGCCGGA--------CATT-------AAGGGAACAGTGGCTTCTCTTGG 1112
|| |||| |||| ||.||..|.||.||||||||.||
BL03146___yum 1017 AA--CGGAAACGTTCTCATTTGATAACAAAGGCTCTGTCGCTTCTCTCGG 1064
BSNT_04723___ 1113 CGAGCATAACGCGGTTGGGGTTGTTTATGGCAGAAAGCTGAAAGGCACGC 1162
|||.||..|.||..|.||.||.|..|..|||||||||.|||..||.|||.
BL03146___yum 1065 CGAACACGATGCAATCGGCGTCGCATTCGGCAGAAAGATGACGGGAACGA 1114
BSNT_04723___ 1163 CCGCTTCGTTTATGAAAAAAGTCATTGATAACCGCTCGCTGTTTATGATT 1212
|.||.||..|.|||||||||.||||.||.|||||||||||.||.|||||.
BL03146___yum 1115 CGGCGTCCATGATGAAAAAAATCATCGACAACCGCTCGCTTTTCATGATC 1164
BSNT_04723___ 1213 GGCGGACTCGGACTGACACTGAAAAAAGGCAAGTTCAAGTTTTTCTAA 1260
|||||.|..|||||....|||||||||||||||||.||.|||||||.|
BL03146___yum 1165 GGCGGGCCGGGACTTGTTCTGAAAAAAGGCAAGTTTAAATTTTTCTGA 1212
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