Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04721 and BL03145

See Amino acid alignment / Visit BSNT_04721 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:57
# Commandline: needle
#    -asequence dna-align/BSNT_04721___yuiB.1.5803.seq
#    -bsequence dna-align/BL03145___yuiB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04721___yuiB-BL03145___yuiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04721___yuiB-BL03145___yuiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04721___yuiB
# 2: BL03145___yuiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity:     253/323 (78.3%)
# Similarity:   253/323 (78.3%)
# Gaps:           4/323 ( 1.2%)
# Score: 980.0
# 
#
#=======================================

BSNT_04721___      1 TTGATTAGTCTGCCAGTCGTAATCATCTCAATTGTTTTGTTTTTTGTCTT     50
                     |||||||||.|.|||||.||.|||||.|||.||||.||.|||||.|||.|
BL03145___yui      1 TTGATTAGTTTACCAGTTGTCATCATTTCAGTTGTCTTATTTTTCGTCCT     50

BSNT_04721___     51 GTTTTTTGGCATCGGTTTCTTATTAAACATGCTGCTGAGAATGTCTTGGA    100
                     ||||||.|||||||||||..|..|.||.||||||||.||||||||.||||
BL03145___yui     51 GTTTTTCGGCATCGGTTTTCTGCTGAATATGCTGCTCAGAATGTCATGGA    100

BSNT_04721___    101 TTATGGCTGTGATTTATCCGATTGTATGCCTTTTCATTATCAGCAAAGAT    150
                     |.||||||||.||||||||.||||||||||||||||||.|.|..|||||.
BL03145___yui    101 TCATGGCTGTCATTTATCCAATTGTATGCCTTTTCATTGTGAATAAAGAA    150

BSNT_04721___    151 AAGCTGATCAGCTATGTCCAGTCGCCGGGAGAATCCTTTGCCAGCCTGTT    200
                     ||||||||..|||||||..||.||||||||||..|.|||.||.||||.||
BL03145___yui    151 AAGCTGATTCGCTATGTAGAGGCGCCGGGAGAGGCATTTTCCGGCCTTTT    200

BSNT_04721___    201 T--CATCGTGTCTTATCATTAGCGGCTGCCGATGTGCTGATTTTAGTCAG    248
                     |  ||..|||.||  ||.||.||.|||||||||.|..|.|||||||.|||
BL03145___yui    201 TGACAGAGTGGCT--TCTTTGGCTGCTGCCGATATCATCATTTTAGCCAG    248

BSNT_04721___    249 CGGTTTGGCCGGCGCCATCGTGTCCGGTATAGCGATCAACATGCTCAGAA    298
                     |||..|||||||.|||.|..||||.||..|..|||||||...|||..|||
BL03145___yui    249 CGGAATGGCCGGAGCCCTGTTGTCGGGCGTTACGATCAAAGCGCTGCGAA    298

BSNT_04721___    299 AAAGAGGATATCAAATGTTTTAA    321
                     ||||.||||||||||||||||||
BL03145___yui    299 AAAGGGGATATCAAATGTTTTAA    321


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