Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04718 and BL03144
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:57
# Commandline: needle
# -asequence dna-align/BSNT_04718___yuiC.1.5803.seq
# -bsequence dna-align/BL03144___yuiC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04718___yuiC-BL03144___yuiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04718___yuiC-BL03144___yuiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04718___yuiC
# 2: BL03144___yuiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 695
# Identity: 487/695 (70.1%)
# Similarity: 487/695 (70.1%)
# Gaps: 61/695 ( 8.8%)
# Score: 1640.5
#
#
#=======================================
BSNT_04718___ 1 ---------ATGTTGAATATGATCAGACGTTTGCTGATGACCTGTTTATT 41
.||.|||.||||.||.|.|||||..|||||||...|||.||
BL03144___yui 1 TTGAGAAAAGTGATGACTATGTTCCGGCGTTTCTTGATGACAGTTTTGTT 50
BSNT_04718___ 42 TCTGCTTGCATTTGGCACGACATTTTTATCAGTGTCAGGAATTGAAGCGA 91
|.|.|||||.|||...|||||.||.||..|.||.|||||..|.||.||..
BL03144___yui 51 TGTCCTTGCTTTTATGACGACCTTCTTTGCCGTTTCAGGCGTGGAGGCAC 100
BSNT_04718___ 92 AGGACTTGTCAAAATGGGTGCAGGAAC---ATCAG-----GAAA-AGCAC 132
||||..|.||.|..||||...|.|||| |||.| |||| |||
BL03144___yui 101 AGGATATATCCAGCTGGGCAAAAGAACGCGATCTGTCCTTGAAACAGC-- 148
BSNT_04718___ 133 TTGAAGCATGCAGGACTGACATTAAAAGCA-TTGCAGCAGAAACAAACAC 181
|||.| ||.||.||.|||.|| ||.|.|.||||| ||.|..
BL03144___yui 149 -TGATG---------CTCACCTTTAAATCACTTCCCGAAGAAA-AAGCGG 187
BSNT_04718___ 182 AAACCAC------GTCCGCGGCTGAGGA---TAAAACTAAACCG------ 216
|||..|| |||.||.||.||..| |||||..||||||
BL03144___yui 188 AAAAGACGTCTCTGTCTGCCGCAGAACAAATTAAAAACAAACCGAAATCG 237
BSNT_04718___ 217 -TTAGAAGAGGCATTTGATTGGGATGAA-TATCC--AGTCCAAAGAGTAA 262
|| |||||.||.|||||.| |||..|| ||||| || ||||.|||.|
BL03144___yui 238 CTT-GAAGACGCGTTTGACT-GGAGCAAGTATCCGAAG--CAAAAAGTCA 283
BSNT_04718___ 263 CAGCAACAGGCTACACAGCAGGAGCTGAGTCGACGGGCAAAAATCCCGGT 312
|.||.||.||.||.||||||||.|||||.||.|||||.|||.|.||...|
BL03144___yui 284 CCGCGACCGGATATACAGCAGGGGCTGAATCAACGGGAAAACAGCCTCAT 333
BSNT_04718___ 313 GATCC--ATTATACGGGCTTACATATTCAGGTGTGAAAGTGAAACGGGAT 360
.|||| || ||||||.||||||||||.||.||.|||||.|||.|.|||
BL03144___yui 334 CATCCCGAT--TACGGGATTACATATTCGGGAGTCAAAGTAAAAAGAGAT 381
BSNT_04718___ 361 TTATATTCCACGGTTGCTGCTGACCCGTCCGTTTTCCCGATCGGAACAAT 410
||||||||.||.|||||.||.||||||||.||.||.||||||||.||.||
BL03144___yui 382 TTATATTCAACCGTTGCAGCCGACCCGTCGGTCTTTCCGATCGGCACCAT 431
BSNT_04718___ 411 TTTATTCATTCCGAACTACGGTCT-CGGCGTTGTAGCCGACACAGGATCA 459
.||.|||||.|||.||||||| || .||.|||||.||.||.||.||||||
BL03144___yui 432 ATTGTTCATCCCGGACTACGG-CTATGGGGTTGTTGCGGATACCGGATCA 480
BSNT_04718___ 460 GCTATTAAGGGAAACCGCCTTGATCTGTACTTTGAGACAGTCAAAGATGT 509
||.||||||||||||||.||.|||.||||||.||||||.||..|.|||||
BL03144___yui 481 GCCATTAAGGGAAACCGGCTCGATTTGTACTATGAGACGGTTGAGGATGT 530
BSNT_04718___ 510 ATACAATGAATGGGGCAAAAAAACCCTTGATGTATATGTGATTAAAAAGG 559
.||.||.|||||||||||||||||.||||||||.|||||.||||||||.|
BL03144___yui 531 TTATAAAGAATGGGGCAAAAAAACACTTGATGTTTATGTCATTAAAAAAG 580
BSNT_04718___ 560 GAACGGGAAAGATTACCGAGGATGAGCTTGAGAAGCTCAATGAAACAAAA 609
|||..||.|..||||||||.||.||.||...||||||.|||||||..|||
BL03144___yui 581 GAAACGGCACCATTACCGAAGAGGATCTCCTGAAGCTGAATGAAAATAAA 630
BSNT_04718___ 610 TCTTTGCAAGTGTTCAGAAATCAATATAAAACGGTGAAAGAATAA 654
||..|||||||.||||||.|..|||||||||.||.||||||||||
BL03144___yui 631 TCGATGCAAGTATTCAGACAAAAATATAAAATGGCGAAAGAATAA 675
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