Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04717 and BL03142
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:57
# Commandline: needle
# -asequence dna-align/BSNT_04717___yuiD.1.5803.seq
# -bsequence dna-align/BL03142___yuiD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04717___yuiD-BL03142___yuiD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04717___yuiD-BL03142___yuiD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04717___yuiD
# 2: BL03142___yuiD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity: 357/483 (73.9%)
# Similarity: 357/483 (73.9%)
# Gaps: 12/483 ( 2.5%)
# Score: 1285.0
#
#
#=======================================
BSNT_04717___ 1 ATGGAACTTTTAACGAATTTTCCTTTATTATCAAGCCTGGCCGCAATTAT 50
||||||.|..|.||.||.||||||||..|..|.|||.|.|||||.||..|
BL03142___yui 1 ATGGAAATCCTCACAAACTTTCCTTTGCTGGCGAGCTTTGCCGCGATCTT 50
BSNT_04717___ 51 TTTTGCTCAGGTCATCAAAGTGCCCATACAGTTTATCGTGTCCAGAAAAC 100
|||.||||||.|.|||||.||.|||||..|.|||.||||.||.|.||||.
BL03142___yui 51 TTTCGCTCAGTTTATCAAGGTTCCCATTTACTTTGTCGTCTCAAAAAAAT 100
BSNT_04717___ 101 TGGACTGGTCGCTGGTCACAAGCACAGGCGGCATGCCGAGCTCTCACTCC 150
.|||.|||..|||.|||||||||||.|||||.||||||||.||.|||||.
BL03142___yui 101 GGGATTGGCGGCTTGTCACAAGCACGGGCGGAATGCCGAGTTCACACTCA 150
BSNT_04717___ 151 GCAGCGGTCACTGCGCTTTCTACAGGAGTAGC-CTTGGAGCATGGATTAG 199
||.||.|||||.|||||.||.||.||.||||| ||| ||.||.||..|.|
BL03142___yui 151 GCGGCCGTCACGGCGCTCTCGACCGGTGTAGCTCTT-GATCACGGGATGG 199
BSNT_04717___ 200 ACTCCTCACTCTTTGCGGTTTCCGCCATTTTCGCCGTCATAACCATGTTT 249
|.||.||..|.||.||.||||||||.||.||.|||||.||.||.||||||
BL03142___yui 200 ATTCTTCTTTGTTCGCCGTTTCCGCAATATTTGCCGTTATTACGATGTTT 249
BSNT_04717___ 250 GACGCAACTGGCGTCAGACGTCACGCCGGTGAGCAGGCAACAGTCATTAA 299
||.|||||.||.||.|||.|.||.|||||.||.||.||||||||.||.||
BL03142___yui 250 GATGCAACCGGAGTGAGAAGACATGCCGGAGAACAAGCAACAGTGATCAA 299
BSNT_04717___ 300 TAAGCTTGTTATTGATTTTAACCGTTTCGTAAATGAAGCGAAGGACTTCC 349
...||||||....|||||||||||.||.||.||.|||||||||||.||||
BL03142___yui 300 CCGGCTTGTCCGCGATTTTAACCGCTTTGTCAACGAAGCGAAGGATTTCC 349
BSNT_04717___ 350 CTAAGGCTGCAG-----AGAAAGAAAAGCAAAAAAAGCTGAAAGAGCTTC 394
|||| .|| ||.|||||||.||.|||||||||||.||.||.|
BL03142___yui 350 CTAA-----AAGCCATCAGGAAGAAAAACAGAAAAAGCTGAAGGAACTGC 394
BSNT_04717___ 395 TCGGACATCAGCCGATCGAAGTCTTTTTCGGAGGATTAACAGGTATTTTA 444
||||.|||||||||||.|||||.||||||||.||..|.||.||.|||..|
BL03142___yui 395 TCGGCCATCAGCCGATTGAAGTGTTTTTCGGCGGCCTGACCGGCATTGCA 444
BSNT_04717___ 445 CTGACATTGGTACTCGCTTACTTTTTCATGTAA 477
|||||..||.|.||||.|||.||.||.||||||
BL03142___yui 445 CTGACGCTGCTTCTCGATTATTTATTGATGTAA 477
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