Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03922 and BL03124
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_03922___levD.1.5803.seq
# -bsequence dna-align/BL03124___levD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03922___levD-BL03124___levD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03922___levD-BL03124___levD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03922___levD
# 2: BL03124___levD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 352/450 (78.2%)
# Similarity: 352/450 (78.2%)
# Gaps: 21/450 ( 4.7%)
# Score: 1375.0
#
#
#=======================================
BSNT_03922___ 1 ATGATTTCAGTTATTATCAGCGGTCATGGAGATTTTCCCATAGCATTAAA 50
||||||.||||.|||||||||||.||.|||.|.|||||||||||||||||
BL03124___lev 1 ATGATTACAGTCATTATCAGCGGCCACGGAAACTTTCCCATAGCATTAAA 50
BSNT_03922___ 51 AGAATCTTCAGGGATGATATTCGGTGAAGAAAATAACCTGATTGCAGTGC 100
||||||||||||||||||||||||.|||||..|.|.||||||.||.||||
BL03124___lev 51 AGAATCTTCAGGGATGATATTCGGAGAAGAGGAGAGCCTGATCGCGGTGC 100
BSNT_03922___ 101 CGTTTTTTAAAGGGGAAGGAATACAAACGCTGCAAGAAAAATATCATCAG 150
|||||.|.|||||||||||.||.||.||.|||||||||||||||||||||
BL03124___lev 101 CGTTTCTGAAAGGGGAAGGCATTCAGACACTGCAAGAAAAATATCATCAG 150
BSNT_03922___ 151 GCGCTCAAGGATATCCCGGAAGAACATGAAGTGCTTTTTTTAGTCGATAT 200
.||||.||||||.|.|||||.|||||.||.||||||||||||||.|||||
BL03124___lev 151 ACGCTGAAGGATGTTCCGGAGGAACACGAGGTGCTTTTTTTAGTGGATAT 200
BSNT_03922___ 201 TTTTGGAGGGACGCCATATAACGCGGCAGCTTCCTTT--ATTGCTGAGGA 248
|||.||.|||||||||||||||||.||..| ||.|| ||.||..|.||
BL03124___lev 201 TTTCGGCGGGACGCCATATAACGCAGCGAC--CCCTTACATCGCGAAAGA 248
BSNT_03922___ 249 TCAAAGAATGGATATGGCAGCCGGCGTAAACCTGCCGATTCTGCTGGAGG 298
.|..|||.|.||||||||||||||.||.||||||||||||.||.|.||||
BL03124___lev 249 GCGGAGATTCGATATGGCAGCCGGAGTGAACCTGCCGATTTTGTTAGAGG 298
BSNT_03922___ 299 TATTAAGCCAGAGAGAACATCTGGCTCTCAAAGATTTGCTGAACAACTT- 347
.|||.|||..|||.||.|||.||.|.||||||.|..||||||||.|.||
BL03124___lev 299 CATTGAGCTTGAGGGAGCATATGCCGCTCAAACAACTGCTGAACCAGTTG 348
BSNT_03922___ 348 -AAAAGCAATGAGTCAGCAAAGCTTTCAAGTGTGCAGTGAACATTTAGAA 396
||||| |||||.|.|.||.||||.|||.|.|||||.||.||.||.|||
BL03124___lev 349 AAAAAG--ATGAGCCGGGAATGCTTCCAAATATGCAGCGAGCAATTGGAA 396
BSNT_03922___ 397 AAAGTAAAAACAG-----CCAATCAAGATACAAGAGAGGATGAATTATGA 441
|||.| ||| |||||||.| .|||||||||||||||.|.|
BL03124___lev 397 AAATT-----CAGTCAGTCCAATCAGG---GAAGAGAGGATGAATTGTAA 438
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