Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03922 and BL03124

See Amino acid alignment / Visit BSNT_03922 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence dna-align/BSNT_03922___levD.1.5803.seq
#    -bsequence dna-align/BL03124___levD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03922___levD-BL03124___levD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03922___levD-BL03124___levD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03922___levD
# 2: BL03124___levD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity:     352/450 (78.2%)
# Similarity:   352/450 (78.2%)
# Gaps:          21/450 ( 4.7%)
# Score: 1375.0
# 
#
#=======================================

BSNT_03922___      1 ATGATTTCAGTTATTATCAGCGGTCATGGAGATTTTCCCATAGCATTAAA     50
                     ||||||.||||.|||||||||||.||.|||.|.|||||||||||||||||
BL03124___lev      1 ATGATTACAGTCATTATCAGCGGCCACGGAAACTTTCCCATAGCATTAAA     50

BSNT_03922___     51 AGAATCTTCAGGGATGATATTCGGTGAAGAAAATAACCTGATTGCAGTGC    100
                     ||||||||||||||||||||||||.|||||..|.|.||||||.||.||||
BL03124___lev     51 AGAATCTTCAGGGATGATATTCGGAGAAGAGGAGAGCCTGATCGCGGTGC    100

BSNT_03922___    101 CGTTTTTTAAAGGGGAAGGAATACAAACGCTGCAAGAAAAATATCATCAG    150
                     |||||.|.|||||||||||.||.||.||.|||||||||||||||||||||
BL03124___lev    101 CGTTTCTGAAAGGGGAAGGCATTCAGACACTGCAAGAAAAATATCATCAG    150

BSNT_03922___    151 GCGCTCAAGGATATCCCGGAAGAACATGAAGTGCTTTTTTTAGTCGATAT    200
                     .||||.||||||.|.|||||.|||||.||.||||||||||||||.|||||
BL03124___lev    151 ACGCTGAAGGATGTTCCGGAGGAACACGAGGTGCTTTTTTTAGTGGATAT    200

BSNT_03922___    201 TTTTGGAGGGACGCCATATAACGCGGCAGCTTCCTTT--ATTGCTGAGGA    248
                     |||.||.|||||||||||||||||.||..|  ||.||  ||.||..|.||
BL03124___lev    201 TTTCGGCGGGACGCCATATAACGCAGCGAC--CCCTTACATCGCGAAAGA    248

BSNT_03922___    249 TCAAAGAATGGATATGGCAGCCGGCGTAAACCTGCCGATTCTGCTGGAGG    298
                     .|..|||.|.||||||||||||||.||.||||||||||||.||.|.||||
BL03124___lev    249 GCGGAGATTCGATATGGCAGCCGGAGTGAACCTGCCGATTTTGTTAGAGG    298

BSNT_03922___    299 TATTAAGCCAGAGAGAACATCTGGCTCTCAAAGATTTGCTGAACAACTT-    347
                     .|||.|||..|||.||.|||.||.|.||||||.|..||||||||.|.|| 
BL03124___lev    299 CATTGAGCTTGAGGGAGCATATGCCGCTCAAACAACTGCTGAACCAGTTG    348

BSNT_03922___    348 -AAAAGCAATGAGTCAGCAAAGCTTTCAAGTGTGCAGTGAACATTTAGAA    396
                      |||||  |||||.|.|.||.||||.|||.|.|||||.||.||.||.|||
BL03124___lev    349 AAAAAG--ATGAGCCGGGAATGCTTCCAAATATGCAGCGAGCAATTGGAA    396

BSNT_03922___    397 AAAGTAAAAACAG-----CCAATCAAGATACAAGAGAGGATGAATTATGA    441
                     |||.|     |||     |||||||.|   .|||||||||||||||.|.|
BL03124___lev    397 AAATT-----CAGTCAGTCCAATCAGG---GAAGAGAGGATGAATTGTAA    438


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