Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03921 and BL03123
See
Amino acid alignment /
Visit
BSNT_03921 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_03921___levE.1.5803.seq
# -bsequence dna-align/BL03123___levE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03921___levE-BL03123___levE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03921___levE-BL03123___levE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03921___levE
# 2: BL03123___levE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity: 390/498 (78.3%)
# Similarity: 390/498 (78.3%)
# Gaps: 12/498 ( 2.4%)
# Score: 1525.0
#
#
#=======================================
BSNT_03921___ 1 ATGATGAACATTGTGTTAGCAAGAATCGATGACCGCTTTATTCACGGCCA 50
|||||.||.||.||.||||||||.|||||||||||||||||||||||
BL03123___lev 1 ---ATGAAAATCGTTTTGGCAAGAATTGATGACCGCTTTATTCACGGCCA 47
BSNT_03921___ 51 AATCCTGACAAGGTGGATAAAAGTCCATGCAGCCGACCGAATCATCGTTG 100
|.|..|.|||||.|||||.|||.||||.||.||.||.||.||.|||||||
BL03123___lev 48 AGTATTAACAAGATGGATCAAAATCCACGCTGCTGATCGCATTATCGTTG 97
BSNT_03921___ 101 TCTCCGACGATATTGCTCAGGACGAAATGAGAAAAACGCTGATCCTTTCT 150
|||||.|.||..|.||.|||||||||||||||||||||||||||||||||
BL03123___lev 98 TCTCCAATGAGGTGGCACAGGACGAAATGAGAAAAACGCTGATCCTTTCT 147
BSNT_03921___ 151 GTTGCGCCTTCAAATGTAAAGGCGAGTGCCGTCTCGGTTTCTAAAATGGC 200
|||||.||||||||||||||.||.||.|||||.|||.||||.||||||||
BL03123___lev 148 GTTGCACCTTCAAATGTAAAAGCCAGCGCCGTTTCGATTTCCAAAATGGC 197
BSNT_03921___ 201 AAAAGCATTTCATAGTCCGCGCTACGAAGGCGTA--ACAGCAATGCTCTT 248
.|||||.||.||.||||||||.||||||| .|| ||.||||||||.||
BL03123___lev 198 CAAAGCGTTCCACAGTCCGCGGTACGAAG--ATACGACGGCAATGCTGTT 245
BSNT_03921___ 249 GTTTGAAAATCCGTCCGATATTGTATCTCTT-ATAGAAGCAGGTGTACCG 297
.||.|||||||||..|||.|||||.|| ||| ||.||||||||.||.|||
BL03123___lev 246 ATTCGAAAATCCGGGCGACATTGTTTC-CTTAATCGAAGCAGGCGTTCCG 294
BSNT_03921___ 298 ATCAAAACCGTAAACGTCGGGGGAATGCGTTTTGAAAATCACCGCAGGCA 347
|||.|||..||.||.|||||.||.||||||||.||.|||.||||||||||
BL03123___lev 295 ATCGAAATAGTCAATGTCGGCGGGATGCGTTTCGAGAATAACCGCAGGCA 344
BSNT_03921___ 348 AATCACAAAATCAGTCAGTGTCACAGAACAAGATATAAAGGCATTTGAAA 397
||||||.|||||.||.||.||.||.|||.|.||.||.||..|.||.|||.
BL03123___lev 345 AATCACGAAATCGGTAAGCGTTACTGAAAAGGACATCAAATCGTTCGAAC 394
BSNT_03921___ 398 CATTAAGTGACAAGGGCGTGAAACTGGAATTGAGGCAGCTGCCTTCAGAT 447
.|||...|||...|||||||||.||||||.|||||||||||||.||||||
BL03123___lev 395 AATTGCATGAATTGGGCGTGAAGCTGGAACTGAGGCAGCTGCCGTCAGAT 444
BSNT_03921___ 448 GCCAGTGAGGATTTTGTACAGATTTTACGGAACGTAACAAAATAA--- 492
.|.||.||.||.|||.|.|||||.|||.|.||||.||||||||..
BL03123___lev 445 TCGAGCGAAGACTTTATGCAGATGTTAAGAAACGCAACAAAATCCTAG 492
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.