Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03920 and BL03122
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_03920___levF.1.5803.seq
# -bsequence dna-align/BL03122___levF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03920___levF-BL03122___levF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03920___levF-BL03122___levF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03920___levF
# 2: BL03122___levF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity: 657/816 (80.5%)
# Similarity: 657/816 (80.5%)
# Gaps: 18/816 ( 2.2%)
# Score: 2645.5
#
#
#=======================================
BSNT_03920___ 1 ATGTCTTC-ATTACAAATTATTTTGTTGTTAATCATTGCAGCAATCACCG 49
|||||..| ||| |||||.||||||.||.|..||||.||.||.||.||.|
BL03122___lev 1 ATGTCAACGATT-CAAATCATTTTGCTGCTTGTCATCGCTGCTATAACAG 49
BSNT_03920___ 50 GAATCGCAAGTGTATTGGATGAAGGGCAGACACACCGTCCGCTTGTGGCC 99
|.||||..|||||||||||.||||||||||||||.||.|||||..|.|||
BL03122___lev 50 GTATCGGTAGTGTATTGGACGAAGGGCAGACACATCGCCCGCTGATTGCC 99
BSNT_03920___ 100 TGTACGTTAGTTGGCTTGGTGCTCGGGGACTTAAAAACGGGAATTATTCT 149
||.||.||.||.|||.|.||.||||||||..|.|||||.||.||.|||||
BL03122___lev 100 TGCACTTTGGTCGGCCTTGTCCTCGGGGATCTGAAAACAGGCATCATTCT 149
BSNT_03920___ 150 TGGAGGCACACTGGAGCTGATGGCGCTCGGCTGGATGAACGTCGGGCTTG 199
.||.||.||.|||||||||||||||||.|||||||||||.|||||.||||
BL03122___lev 150 CGGCGGAACGCTGGAGCTGATGGCGCTTGGCTGGATGAATGTCGGTCTTG 199
BSNT_03920___ 200 CCATGGCACCTGATACAGCGATCGCCTCTGTCATCTCAACCATTTTAGTT 249
|.|||||.||.|||||.||.|||||.||.||.||.||.||.||.|||||.
BL03122___lev 200 CAATGGCCCCCGATACGGCCATCGCTTCCGTGATTTCGACTATCTTAGTG 249
BSNT_03920___ 250 ATTACCGCTGATCAGGGAATTGGCGAAGGGATTGCTGTCGCTGTTGCTTT 299
||||||||.|||||||||||.|||||||||||.||.|||||.||.|||||
BL03122___lev 250 ATTACCGCCGATCAGGGAATCGGCGAAGGGATCGCCGTCGCGGTGGCTTT 299
BSNT_03920___ 300 AGCAGCTGCGGGTCAGGCGCTGACGATTTTTGTTCGGACGATCACTGTCT 349
.|||||||||||||||||||||||||||||.||.|||||||||||.||.|
BL03122___lev 300 GGCAGCTGCGGGTCAGGCGCTGACGATTTTCGTCCGGACGATCACCGTAT 349
BSNT_03920___ 350 TTTTCATCCACCGCGCTGATCAATATGCAAAAGCGGGAAATATAAGAGGA 399
||||.||.||||||||.||..||||.|||||.|..||.|||.|.|.||||
BL03122___lev 350 TTTTAATTCACCGCGCCGACAAATACGCAAAGGATGGCAATTTTAAAGGA 399
BSNT_03920___ 400 ATTGAAATTATGCATATTACCGCGATGGTGTTTCAAGCTTTGCGCGTCAT 449
|||||||||||||||||.||.||.||||.||||||.||..|||||||.||
BL03122___lev 400 ATTGAAATTATGCATATAACTGCCATGGCGTTTCAGGCGCTGCGCGTTAT 449
BSNT_03920___ 450 GATTCCTACATTGATTGTTGCTTTAATTAGTGTCAGCGCTGTTCAGGCGT 499
||||||.||||||||.||.|||.|.||.||||||||||||||||||||||
BL03122___lev 450 GATTCCGACATTGATCGTGGCTCTGATCAGTGTCAGCGCTGTTCAGGCGT 499
BSNT_03920___ 500 TCCTGGGAAATATTCCTGATGTCATTACAAAAGGACTGCAAATAGGCGGA 549
|..|||||||||||||.||.|||||.||||||||..||||||||||||||
BL03122___lev 500 TTTTGGGAAATATTCCGGAAGTCATCACAAAAGGCTTGCAAATAGGCGGA 549
BSNT_03920___ 550 GGCATTATTGTGGTTGTCGGGTATGCCATGGTGATCAATATGATGAATAT 599
||||||||.||.||||||||||||||.|||||.|||||.||||||||.||
BL03122___lev 550 GGCATTATCGTTGTTGTCGGGTATGCGATGGTCATCAACATGATGAACAT 599
BSNT_03920___ 600 TCCTTATTTAAAGCCATTTTTCTATATTGGTTTCTTATTAGCGGCGTTTA 649
|||.|||||.|||||.|||||||||||.|||||.||..|.||.|||||.|
BL03122___lev 600 TCCGTATTTGAAGCCGTTTTTCTATATCGGTTTTTTGCTGGCCGCGTTCA 649
BSNT_03920___ 650 CCGATTTTAACTTAGTGGGATTTGGAGCCCTTGGTCTCTGTCTGGCGCTT 699
|||||||.||.|||||.||.||.||.|||||.||.|||||||||||..||
BL03122___lev 650 CCGATTTCAATTTAGTCGGCTTCGGCGCCCTCGGGCTCTGTCTGGCATTT 699
BSNT_03920___ 700 TTATACCAGCAGGTGATGCAAAAACAAAGC--GCTCACGGAGCAGTCGCG 747
|||||.|||||.||||||||||| |||.| |||||.||.||.||.||.
BL03122___lev 700 TTATATCAGCAAGTGATGCAAAA--AAATCATGCTCAAGGGGCGGTTGCT 747
BSNT_03920___ 748 GCCGCATCAGACAGT---GGCAGTGTTGCTGTTTATGATGACGATGATGA 794
||||| |||| |||||..|.||.|.||||||| |||||.||
BL03122___lev 748 GCCGC------CAGTGACGGCAGCATGGCCGCTTATGAT---GATGACGA 788
BSNT_03920___ 795 TGATCTTGATGCCTAA 810
||||||.|||||.|||
BL03122___lev 789 TGATCTGGATGCTTAA 804
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