Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03919 and BL03121

See Amino acid alignment / Visit BSNT_03919 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence dna-align/BSNT_03919___levG.1.5803.seq
#    -bsequence dna-align/BL03121___levG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03919___levG-BL03121___levG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03919___levG-BL03121___levG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03919___levG
# 2: BL03121___levG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 833
# Identity:     673/833 (80.8%)
# Similarity:   673/833 (80.8%)
# Gaps:          10/833 ( 1.2%)
# Score: 2712.5
# 
#
#=======================================

BSNT_03919___      1 ATGGAGAAAGAAAAACGATTAACGAAGAAAGAAATTTTCAGCATGTTTAT     50
                     ||||..|.|||||||.||||||||||||.|||.||||||||.||||||||
BL03121___lev      1 ATGGGCACAGAAAAAAGATTAACGAAGAGAGAGATTTTCAGTATGTTTAT     50

BSNT_03919___     51 TCGTTCAAATTTTTTACTCGGTTCCTTTAACTTCGAACGTGTGCAGGCAA    100
                     .||.|||||.|||||.|||||.||.||||||||.||.|||||.|||||..
BL03121___lev     51 CCGCTCAAACTTTTTGCTCGGATCTTTTAACTTTGAGCGTGTACAGGCGC    100

BSNT_03919___    101 TGGGATATTGTTATGTCATGATACCGGCGATCAAAAAATTGTACGGTCCC    150
                     |.||.||.||.||.||||||||.|||||||||||||||.||||||||||.
BL03121___lev    101 TCGGCTACTGCTACGTCATGATTCCGGCGATCAAAAAACTGTACGGTCCG    150

BSNT_03919___    151 GGAGCGAAAAGAAACGAAGCCTTGCAGCGGCATTTGGAATGGTTTAATAC    200
                     |||||.|||.|.|.||||||..|.|||||.||||||||||||||||||||
BL03121___lev    151 GGAGCAAAACGGAGCGAAGCGCTCCAGCGCCATTTGGAATGGTTTAATAC    200

BSNT_03919___    201 ACATCCGTGGCTGACAGCGCCTATATTTGGCGTGACGGCAGCCATGGAAG    250
                     |||||||||||||||||||||.|||||||||||.||.||.||.|||||||
BL03121___lev    201 ACATCCGTGGCTGACAGCGCCGATATTTGGCGTAACCGCTGCGATGGAAG    250

BSNT_03919___    251 AAGAAATGGCGAACAATAAAGGAATTGACGGAAAAGCGATAAGCGGAATG    300
                     ||||||||||.|||||||||...|||||.|..|||||.||.|..||||||
BL03121___lev    251 AAGAAATGGCCAACAATAAAAAGATTGATGCCAAAGCAATTAATGGAATG    300

BSNT_03919___    301 AAAATTGGTTTGATGGGACCAATAGCGGGCGTAGGCGACCCAATTTTCTG    350
                     |||||.||.||.|||||.||..|.||.|||||.||||||||.||||||||
BL03121___lev    301 AAAATCGGCTTAATGGGCCCGTTGGCAGGCGTGGGCGACCCGATTTTCTG    350

BSNT_03919___    351 GGGAACGATTCGTCCTGTCTTAGCTGCGCTAGGAGCCTCCCTTGCTTTAG    400
                     |||.|||.|.||.||.||.||.||.||..|.|||||.||.|||||||||.
BL03121___lev    351 GGGGACGTTGCGCCCGGTTTTGGCGGCCTTGGGAGCGTCGCTTGCTTTAA    400

BSNT_03919___    401 GAGGAAACATTGCCGGCCCTTTGCTATTCTTTTTCTTGCTGAAT----GC    446
                     |.||||||||.||||||||   |||.||.|||||||| .|.|||    ||
BL03121___lev    401 GCGGAAACATCGCCGGCCC---GCTTTTGTTTTTCTT-TTTAATCAACGC    446

BSNT_03919___    447 CATAAGATTAAGCACAAAATATTACGGATTAAAGTATGGCTATGTGAAAG    496
                     |.|.|||||||||||.|||||.||||||||||||||.|||||||||||||
BL03121___lev    447 CGTCAGATTAAGCACTAAATACTACGGATTAAAGTACGGCTATGTGAAAG    496

BSNT_03919___    497 GAATGGAGATTCTTCAGGATTTAGCGGGGAATCGCATTCAAAAGCTTACA    546
                     |.|||||.||..|.|||||.||.|.||||||.|||||||||||.||.||.
BL03121___lev    497 GCATGGAAATATTGCAGGACTTGGTGGGGAACCGCATTCAAAAACTGACG    546

BSNT_03919___    547 GAGGGCGCTTCGATTCTCGGGTTATTTGTTATGGGGGCTCTCGTGTCCAA    596
                     ||.||||||||.||.||||||.|.|||||.|||||.||||||||.|||||
BL03121___lev    547 GAAGGCGCTTCAATACTCGGGCTGTTTGTGATGGGAGCTCTCGTTTCCAA    596

BSNT_03919___    597 ATGGACCACCATCAACATTCCAATCGTTGTATCCAGGATTAAGGATGAAA    646
                     .||||||||.|||||.||.||.|||||.||.||.||.|||||||||| |.
BL03121___lev    597 GTGGACCACAATCAATATCCCGATCGTCGTGTCGAGAATTAAGGATG-AT    645

BSNT_03919___    647 GC-GGAAAAGTAGATGTTCAAACGGTACAAAACGTGCTAGACAGCATTAT    695
                     || ||.|||||.|||||.||.||.||.||||||.|..||||||||||.||
BL03121___lev    646 GCAGGCAAAGTCGATGTACAGACCGTGCAAAACATTTTAGACAGCATCAT    695

BSNT_03919___    696 GCCGGGGGCGCTGCCTCTCGGATTAACGTTATTGGTGGCATGGATGCTTC    745
                     |||.||.|.|||||||.|.|||||.||.||..|.|..||.||||||||||
BL03121___lev    696 GCCTGGTGTGCTGCCTTTAGGATTGACATTGCTCGCTGCCTGGATGCTTC    745

BSNT_03919___    746 GCAAAGGGGTGAATCCTCTTCTCATTATTTGCGGCATCTTTGTCATCGGG    795
                     |||||||||||||||||||.|||||.||||.|||.||.|||.||||||||
BL03121___lev    746 GCAAAGGGGTGAATCCTCTGCTCATGATTTTCGGTATTTTTATCATCGGG    795

BSNT_03919___    796 ATTCTCGGGTATTGGGCTGGATTCTTAGCATAA    828
                     |||.||||.||||||||.||.||.||.||||||
BL03121___lev    796 ATTGTCGGCTATTGGGCAGGTTTTTTGGCATAA    828


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.