Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01329 and BL03114
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence dna-align/BSNT_01329.1.5803.seq
# -bsequence dna-align/BL03114___yfkA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01329-BL03114___yfkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01329-BL03114___yfkA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01329
# 2: BL03114___yfkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1137
# Identity: 895/1137 (78.7%)
# Similarity: 895/1137 (78.7%)
# Gaps: 30/1137 ( 2.6%)
# Score: 3517.5
#
#
#=======================================
BSNT_01329 1 ATGACACAAAACACG-AAGCTGCGTCCGATTACGCCCGAGTTTGACCCTT 49
||||||.||||.|.| |.||| ||||||||.||.||.||.|.|||.||.|
BL03114___yfk 1 ATGACAGAAAAAATGCAGGCT-CGTCCGATCACCCCGGAATATGATCCGT 49
BSNT_01329 50 GGGAAGCCTATATGGATGTTGACCAATACGGAGACATGCAGCTGACAAAC 99
||||||||||.|||||.||||||||||..|||||.||.||||||||.|||
BL03114___yfk 50 GGGAAGCCTACATGGACGTTGACCAATTTGGAGATATACAGCTGACGAAC 99
BSNT_01329 100 GTTGAATTCACAACAACGACACTGTGCAATATGAGATGCGAGCATTGTGC 149
||||||||.||.||.|||||.||.|||||||||.|.||||||||.||.||
BL03114___yfk 100 GTTGAATTTACGACGACGACTCTTTGCAATATGCGCTGCGAGCACTGCGC 149
BSNT_01329 150 TGTAGGCTATACATTGCAGCCTAAAGACCCGAATGCTCTGCCAAT-AGAT 198
.||.||.|||||..|.|||.|.||.||||||.|.||.||||||.| || .
BL03114___yfk 150 CGTCGGGTATACGCTCCAGACGAAGGACCCGGACGCGCTGCCAGTCAG-C 198
BSNT_01329 199 CTTCTGTTAAAACGGCTGGAGGAAATCCCGCGCCTCAGATCCATCAGCAT 248
||||||||.||||||||.||.||.||.||.|||||..|.||..|.|||||
BL03114___yfk 199 CTTCTGTTGAAACGGCTTGATGAGATTCCCCGCCTTCGTTCTTTAAGCAT 248
BSNT_01329 249 CACAGGCGGAGAGCCGATGCTTTCGTTGAAATCAGTAAAAGAATATGTTG 298
.||.|||||.|||||||||||.||.||.|||||.|||||.||||||||.|
BL03114___yfk 249 TACGGGCGGCGAGCCGATGCTCTCATTAAAATCTGTAAAGGAATATGTCG 298
BSNT_01329 299 TTCCTTTATTGAAATATGCCCATGAACGGGGTGTGCGGACACAAATTAAT 348
||||||||||.|||||.||.||||||||.||.||||||||.||.||.||.
BL03114___yfk 299 TTCCTTTATTAAAATACGCTCATGAACGCGGCGTGCGGACGCAGATCAAC 348
BSNT_01329 349 TCAAATCTGACCCTCGACATCGAGCGGTACGAATGGATCATTCCGTATCT 398
|||||..||||.|||||.||||..||.|||||...||||||.||.||.||
BL03114___yfk 349 TCAAACTTGACGCTCGATATCGGCCGCTACGAGCTGATCATCCCCTACCT 398
BSNT_01329 399 CGATGTGCTACATATTTCTCATAACTGGGGTACAGTTGAAGATTTTGCTG 448
.||||||||.||||||||.||.||||||||.||.||.|||||.|||||.|
BL03114___yfk 399 GGATGTGCTTCATATTTCCCACAACTGGGGAACGGTCGAAGACTTTGCAG 448
BSNT_01329 449 AAATCGGCTTTGCCATGATGGACAGAAAACCGACCTTCGAACAGCGCGCG 498
||||||||||.||.||||||||.|.|||.|||||.||.|.||||||.|||
BL03114___yfk 449 AAATCGGCTTCGCTATGATGGATAAAAAGCCGACGTTTGCACAGCGGGCG 498
BSNT_01329 499 CGCTATTTTGAAAAAATGATCGAAAACAGCCGCACGCTCGTGGATGCCGG 548
||||||||.|||||||||||||||||||||||.|||||.||.||||..||
BL03114___yfk 499 CGCTATTTCGAAAAAATGATCGAAAACAGCCGGACGCTTGTTGATGAAGG 548
BSNT_01329 549 AGTAATGGTATCTGCGGAAACGATGCTGAACAAACGAACACTTCCGCATA 598
.||.|||||.||.||.||.||||||||.||||||||.||.|||||.||||
BL03114___yfk 549 GGTCATGGTCTCCGCCGAGACGATGCTCAACAAACGGACGCTTCCTCATA 598
BSNT_01329 599 TTGAGCATATTCACCGCCAAATCACAGAAGATATGAAATGTCAGCGTCAC 648
|.||||||||||||||.|||||....|||||.||||||||.|||||.||.
BL03114___yfk 599 TCGAGCATATTCACCGGCAAATTGTCGAAGACATGAAATGCCAGCGCCAT 648
BSNT_01329 649 GAGGTCCACCCAATGTATCCAAGCGATTTCGCAAGCGCTCTTGAATCCCT 698
||||||||.||.||||||||.|||||.||.||||||||.||||||||..|
BL03114___yfk 649 GAGGTCCATCCGATGTATCCGAGCGACTTTGCAAGCGCACTTGAATCTTT 698
BSNT_01329 699 CAGCCTGAAAGAGATGAGACAGGCCATTCACCGCTTGCTGGATATTCGTG 748
.|||.|.|||||.||||||.|.||.||.||||||.|.||.||.|||||.|
BL03114___yfk 699 AAGCTTAAAAGACATGAGAAAAGCGATCCACCGCCTTCTTGACATTCGCG 748
BSNT_01329 749 ATGAAAATACGTGGATGCTGTTCGGAACGCTGCCGTTTTATGCCTGCAG- 797
|.|||||||||||||||||||||||.||.|||||||||||.||.|||||
BL03114___yfk 749 ACGAAAATACGTGGATGCTGTTCGGCACTCTGCCGTTTTACGCGTGCAGC 798
BSNT_01329 798 -----TCCGGACGAAGACGACCAAAAGCTGCTT-CGCCGGCTTCGCGCGG 841
|||.||.||..|||.|| .||| |..|||||.||||..|
BL03114___yfk 799 CCTGATCCTGAAGATCACGCCC-------TCTTACAGCGGCTGCGCGAAG 841
BSNT_01329 842 CGAAAAACGTCACAGTGCGAAATGACCCTGACGGCCGGTCCCGCCTGAAT 891
|||||||||||||.||..||||.||||||||||||.|.||.||||||||.
BL03114___yfk 842 CGAAAAACGTCACCGTCAGAAACGACCCTGACGGCAGATCGCGCCTGAAC 891
BSNT_01329 892 GTGAACATTTTCGACGGAAACATTATCGTGACCGATTTCGGTGATACCCC 941
||.||.|||||.|||||.||.||.|||||||||||||||||.|||||.||
BL03114___yfk 892 GTCAATATTTTTGACGGCAATATCATCGTGACCGATTTCGGAGATACTCC 941
BSNT_01329 942 GCCGCTTGGCAACATTCAGACGGACAGCCTCCCTTCCGCCTATGAAAAGT 991
||||||.||||||||||||||.||||||||.||...||||||.|..||||
BL03114___yfk 942 GCCGCTCGGCAACATTCAGACAGACAGCCTGCCAAGCGCCTACGCGAAGT 991
BSNT_01329 992 GGAGAGAGACCAAGCTTGCGAAAGAACTAAGTTGCCACTGCCCGAATGTC 1041
|||||.|.||..|||||||.||||||||.|..||||||||||||.|.|||
BL03114___yfk 992 GGAGAAAAACAGAGCTTGCCAAAGAACTCAACTGCCACTGCCCGCACGTC 1041
BSNT_01329 1042 CGGTGCCTCGGACCGAATGTTCTTGTCAAAAACAGTTATTATCAGGATAC 1091
||||||||||||||||||||.||.|||||||||||.||||||||.|||..
BL03114___yfk 1042 CGGTGCCTCGGACCGAATGTGCTCGTCAAAAACAGCTATTATCAAGATGT 1091
BSNT_01329 1092 AG-----ACTTCACAAAACGTCAAGCCAGGAGTTAG- 1122
.| ||||| ||.|||..||| ||||..|
BL03114___yfk 1092 TGATTTTACTTC-CAGAACAGCAA-----GAGTATGA 1122
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