Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01329 and BL03114

See Amino acid alignment / Visit BSNT_01329 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:51
# Commandline: needle
#    -asequence dna-align/BSNT_01329.1.5803.seq
#    -bsequence dna-align/BL03114___yfkA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01329-BL03114___yfkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01329-BL03114___yfkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01329
# 2: BL03114___yfkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1137
# Identity:     895/1137 (78.7%)
# Similarity:   895/1137 (78.7%)
# Gaps:          30/1137 ( 2.6%)
# Score: 3517.5
# 
#
#=======================================

BSNT_01329         1 ATGACACAAAACACG-AAGCTGCGTCCGATTACGCCCGAGTTTGACCCTT     49
                     ||||||.||||.|.| |.||| ||||||||.||.||.||.|.|||.||.|
BL03114___yfk      1 ATGACAGAAAAAATGCAGGCT-CGTCCGATCACCCCGGAATATGATCCGT     49

BSNT_01329        50 GGGAAGCCTATATGGATGTTGACCAATACGGAGACATGCAGCTGACAAAC     99
                     ||||||||||.|||||.||||||||||..|||||.||.||||||||.|||
BL03114___yfk     50 GGGAAGCCTACATGGACGTTGACCAATTTGGAGATATACAGCTGACGAAC     99

BSNT_01329       100 GTTGAATTCACAACAACGACACTGTGCAATATGAGATGCGAGCATTGTGC    149
                     ||||||||.||.||.|||||.||.|||||||||.|.||||||||.||.||
BL03114___yfk    100 GTTGAATTTACGACGACGACTCTTTGCAATATGCGCTGCGAGCACTGCGC    149

BSNT_01329       150 TGTAGGCTATACATTGCAGCCTAAAGACCCGAATGCTCTGCCAAT-AGAT    198
                     .||.||.|||||..|.|||.|.||.||||||.|.||.||||||.| || .
BL03114___yfk    150 CGTCGGGTATACGCTCCAGACGAAGGACCCGGACGCGCTGCCAGTCAG-C    198

BSNT_01329       199 CTTCTGTTAAAACGGCTGGAGGAAATCCCGCGCCTCAGATCCATCAGCAT    248
                     ||||||||.||||||||.||.||.||.||.|||||..|.||..|.|||||
BL03114___yfk    199 CTTCTGTTGAAACGGCTTGATGAGATTCCCCGCCTTCGTTCTTTAAGCAT    248

BSNT_01329       249 CACAGGCGGAGAGCCGATGCTTTCGTTGAAATCAGTAAAAGAATATGTTG    298
                     .||.|||||.|||||||||||.||.||.|||||.|||||.||||||||.|
BL03114___yfk    249 TACGGGCGGCGAGCCGATGCTCTCATTAAAATCTGTAAAGGAATATGTCG    298

BSNT_01329       299 TTCCTTTATTGAAATATGCCCATGAACGGGGTGTGCGGACACAAATTAAT    348
                     ||||||||||.|||||.||.||||||||.||.||||||||.||.||.||.
BL03114___yfk    299 TTCCTTTATTAAAATACGCTCATGAACGCGGCGTGCGGACGCAGATCAAC    348

BSNT_01329       349 TCAAATCTGACCCTCGACATCGAGCGGTACGAATGGATCATTCCGTATCT    398
                     |||||..||||.|||||.||||..||.|||||...||||||.||.||.||
BL03114___yfk    349 TCAAACTTGACGCTCGATATCGGCCGCTACGAGCTGATCATCCCCTACCT    398

BSNT_01329       399 CGATGTGCTACATATTTCTCATAACTGGGGTACAGTTGAAGATTTTGCTG    448
                     .||||||||.||||||||.||.||||||||.||.||.|||||.|||||.|
BL03114___yfk    399 GGATGTGCTTCATATTTCCCACAACTGGGGAACGGTCGAAGACTTTGCAG    448

BSNT_01329       449 AAATCGGCTTTGCCATGATGGACAGAAAACCGACCTTCGAACAGCGCGCG    498
                     ||||||||||.||.||||||||.|.|||.|||||.||.|.||||||.|||
BL03114___yfk    449 AAATCGGCTTCGCTATGATGGATAAAAAGCCGACGTTTGCACAGCGGGCG    498

BSNT_01329       499 CGCTATTTTGAAAAAATGATCGAAAACAGCCGCACGCTCGTGGATGCCGG    548
                     ||||||||.|||||||||||||||||||||||.|||||.||.||||..||
BL03114___yfk    499 CGCTATTTCGAAAAAATGATCGAAAACAGCCGGACGCTTGTTGATGAAGG    548

BSNT_01329       549 AGTAATGGTATCTGCGGAAACGATGCTGAACAAACGAACACTTCCGCATA    598
                     .||.|||||.||.||.||.||||||||.||||||||.||.|||||.||||
BL03114___yfk    549 GGTCATGGTCTCCGCCGAGACGATGCTCAACAAACGGACGCTTCCTCATA    598

BSNT_01329       599 TTGAGCATATTCACCGCCAAATCACAGAAGATATGAAATGTCAGCGTCAC    648
                     |.||||||||||||||.|||||....|||||.||||||||.|||||.||.
BL03114___yfk    599 TCGAGCATATTCACCGGCAAATTGTCGAAGACATGAAATGCCAGCGCCAT    648

BSNT_01329       649 GAGGTCCACCCAATGTATCCAAGCGATTTCGCAAGCGCTCTTGAATCCCT    698
                     ||||||||.||.||||||||.|||||.||.||||||||.||||||||..|
BL03114___yfk    649 GAGGTCCATCCGATGTATCCGAGCGACTTTGCAAGCGCACTTGAATCTTT    698

BSNT_01329       699 CAGCCTGAAAGAGATGAGACAGGCCATTCACCGCTTGCTGGATATTCGTG    748
                     .|||.|.|||||.||||||.|.||.||.||||||.|.||.||.|||||.|
BL03114___yfk    699 AAGCTTAAAAGACATGAGAAAAGCGATCCACCGCCTTCTTGACATTCGCG    748

BSNT_01329       749 ATGAAAATACGTGGATGCTGTTCGGAACGCTGCCGTTTTATGCCTGCAG-    797
                     |.|||||||||||||||||||||||.||.|||||||||||.||.||||| 
BL03114___yfk    749 ACGAAAATACGTGGATGCTGTTCGGCACTCTGCCGTTTTACGCGTGCAGC    798

BSNT_01329       798 -----TCCGGACGAAGACGACCAAAAGCTGCTT-CGCCGGCTTCGCGCGG    841
                          |||.||.||..|||.||       .||| |..|||||.||||..|
BL03114___yfk    799 CCTGATCCTGAAGATCACGCCC-------TCTTACAGCGGCTGCGCGAAG    841

BSNT_01329       842 CGAAAAACGTCACAGTGCGAAATGACCCTGACGGCCGGTCCCGCCTGAAT    891
                     |||||||||||||.||..||||.||||||||||||.|.||.||||||||.
BL03114___yfk    842 CGAAAAACGTCACCGTCAGAAACGACCCTGACGGCAGATCGCGCCTGAAC    891

BSNT_01329       892 GTGAACATTTTCGACGGAAACATTATCGTGACCGATTTCGGTGATACCCC    941
                     ||.||.|||||.|||||.||.||.|||||||||||||||||.|||||.||
BL03114___yfk    892 GTCAATATTTTTGACGGCAATATCATCGTGACCGATTTCGGAGATACTCC    941

BSNT_01329       942 GCCGCTTGGCAACATTCAGACGGACAGCCTCCCTTCCGCCTATGAAAAGT    991
                     ||||||.||||||||||||||.||||||||.||...||||||.|..||||
BL03114___yfk    942 GCCGCTCGGCAACATTCAGACAGACAGCCTGCCAAGCGCCTACGCGAAGT    991

BSNT_01329       992 GGAGAGAGACCAAGCTTGCGAAAGAACTAAGTTGCCACTGCCCGAATGTC   1041
                     |||||.|.||..|||||||.||||||||.|..||||||||||||.|.|||
BL03114___yfk    992 GGAGAAAAACAGAGCTTGCCAAAGAACTCAACTGCCACTGCCCGCACGTC   1041

BSNT_01329      1042 CGGTGCCTCGGACCGAATGTTCTTGTCAAAAACAGTTATTATCAGGATAC   1091
                     ||||||||||||||||||||.||.|||||||||||.||||||||.|||..
BL03114___yfk   1042 CGGTGCCTCGGACCGAATGTGCTCGTCAAAAACAGCTATTATCAAGATGT   1091

BSNT_01329      1092 AG-----ACTTCACAAAACGTCAAGCCAGGAGTTAG-   1122
                     .|     ||||| ||.|||..|||     ||||..| 
BL03114___yfk   1092 TGATTTTACTTC-CAGAACAGCAA-----GAGTATGA   1122


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