Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01318 and BL03111
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence dna-align/BSNT_01318___yfkK.1.5803.seq
# -bsequence dna-align/BL03111___yfkK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01318___yfkK-BL03111___yfkK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01318___yfkK-BL03111___yfkK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01318___yfkK
# 2: BL03111___yfkK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 223
# Identity: 163/223 (73.1%)
# Similarity: 163/223 (73.1%)
# Gaps: 14/223 ( 6.3%)
# Score: 586.0
#
#
#=======================================
BSNT_01318___ 1 TTGTCCAGCCCAAATACAGAAACA-------TTAACTCAAATGATTGAAG 43
|||| |||..|||| ||||| |.||| .|||||||.||||
BL03111___yfk 1 TTGT-CAGATCAAA-----AAACAGCCGAGCTGAAC-AAAATGATCGAAG 43
BSNT_01318___ 44 AGATTTCCCAAAAGCTGAACATGCTGAACGTCGGCGTAATCAAAGCGGAG 93
||||.||.||.||..|.||||||||||||.|||||||.||.|||||.||.
BL03111___yfk 44 AGATCTCACAGAAATTAAACATGCTGAACATCGGCGTCATTAAAGCTGAA 93
BSNT_01318___ 94 GATTTCAGTGATGAGAAGATTGAAGACCTCACGTACCTTCACAGCATGGT 143
||.|||||..||||.|||.||||||||||....|||||.|||...|||||
BL03111___yfk 94 GACTTCAGCAATGAAAAGCTTGAAGACCTTGAATACCTGCACCAAATGGT 143
BSNT_01318___ 144 GATGAAAAAAGAATCATTCAGCCCAAGTGAAATGCAGGCGATTGCTCAAG 193
|||||||||..||||.|||||.||.||.|||||||||||.||.||..|.|
BL03111___yfk 144 GATGAAAAAGAAATCTTTCAGTCCGAGCGAAATGCAGGCAATCGCAGAGG 193
BSNT_01318___ 194 AATTAGCCTCGCTTCGTAAATAA 216
||.|.|||.|.||.||.||||||
BL03111___yfk 194 AACTGGCCGCACTCCGAAAATAA 216
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