Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01291 and BL03103
See
Amino acid alignment /
Visit
BSNT_01291 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence dna-align/BSNT_01291___yflE.1.5803.seq
# -bsequence dna-align/BL03103___yflE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01291___yflE-BL03103___yflE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01291___yflE-BL03103___yflE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01291___yflE
# 2: BL03103___yflE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2021
# Identity: 1286/2021 (63.6%)
# Similarity: 1286/2021 (63.6%)
# Gaps: 364/2021 (18.0%)
# Score: 4586.5
#
#
#=======================================
BSNT_01291___ 1 ATGAAAACATTTATAAAAGAAAGAGGACTGGCCTTCTTCTTAATCGCGGT 50
BL03103___yfl 0 -------------------------------------------------- 0
BSNT_01291___ 51 CGTCCTGTTATGGATCAAAACGTATGTCAGTTATGTCCTGAACTTCAACT 100
BL03103___yfl 0 -------------------------------------------------- 0
BSNT_01291___ 101 TAGGAATAGACAACACGATACAAAAAATATTGCTTTTTGTGAATCCTCTT 150
BL03103___yfl 0 -------------------------------------------------- 0
BSNT_01291___ 151 AGCTCAAGCTTGTTCTTTCTTGGCTTTGGACTCTTGTTCAAGAAAAAATT 200
BL03103___yfl 0 -------------------------------------------------- 0
BSNT_01291___ 201 ACAGCAGACAGCCATTATAGTGATTCATTTTTTAATGTCTTTTTTACTGT 250
|||||||||||.||.|
BL03103___yfl 1 ----------------------------------ATGTCTTTTTTGCTAT 16
BSNT_01291___ 251 ACGCCAACATTGTGTACTACAGATTTTTCAATGATTTTATTACAATTCCG 300
|.||.|||.||||.||||||||||||||||..||.|||||.||..|.||.
BL03103___yfl 17 ATGCGAACGTTGTATACTACAGATTTTTCAGCGACTTTATCACGCTGCCT 66
BSNT_01291___ 301 GTCATTATGCAGGCTAAAACAAACGGCGGCCAACTCGGTGACAGCGCATT 350
|..||.||||||||.|||||||||||.||.||.|||||.||||||...||
BL03103___yfl 67 GCAATCATGCAGGCAAAAACAAACGGAGGACAGCTCGGGGACAGCATCTT 116
BSNT_01291___ 351 TTCGCTGATGAGACCGACTGACGCCTTTTACTTTATCGATACGATCATCC 400
.|||||.|||...|||..|||.|...|.||.||.|||||.||..|.||..
BL03103___yfl 117 CTCGCTTATGCACCCGCTTGATGTTCTGTATTTCATCGACACCTTTATTT 166
BSNT_01291___ 401 TGATC-------ATCTTGGCGATCAAAGTAAACAAGCCTGCCGAAACGTC 443
|.||| .|.||..|.|| ||||..||..|.|||||
BL03103___yfl 167 TAATCGGGCTGGCTGTTTTCTAT-------AACAGACCATCTGAAAC--- 206
BSNT_01291___ 444 AAGCAAAAAATCGTTCCG-----AATTATTTTTGCGTCTT-----CA--- 480
|.|||..||.|| |||| |||| ||..| ||
BL03103___yfl 207 -AACAACGAAGCG-TCCGTTTAAAATT--------GTGATGGGAGCAAGC 246
BSNT_01291___ 481 ATTCTTGTGTTCTTGATCAACCTGGCAGTTGCGGA-ATCAGACCGTCCTG 529
||.||.||.|||.|...|||||||||.|||||.|| ||| ||.|||||.|
BL03103___yfl 247 ATCCTCGTCTTCCTCGCCAACCTGGCCGTTGCCGAGATC-GATCGTCCGG 295
BSNT_01291___ 530 AATTGCTGACAAGATCATTCGACCGGAACTATCTTGTGAAATACTTGGGA 579
|..|.|||||..|.||.||.|||||.|||||.|||||||||||.||||||
BL03103___yfl 296 AGCTTCTGACCCGTTCTTTTGACCGCAACTACCTTGTGAAATATTTGGGA 345
BSNT_01291___ 580 ACATACAATTTCACGATTTATGACGCTGTACAGAATATCAAGTCCAACAG 629
||.|||||.|||||.||.|||||.||.||.||.|||||||||||.|||||
BL03103___yfl 346 ACCTACAACTTCACAATCTATGATGCGGTGCAAAATATCAAGTCAAACAG 395
BSNT_01291___ 630 CCAGCGCGCGCTTGCCGATTCCAGCGACGTGACGGAAGTAGAAAACTACA 679
|||||||||.||.||...||||||||||||.||||||||.||.|||||.|
BL03103___yfl 396 CCAGCGCGCACTGGCAAGTTCCAGCGACGTAACGGAAGTTGAGAACTATA 445
BSNT_01291___ 680 TGAAAGCCAATTACGATGTGCCGAATAACGTGTATTTCGGCAAAGCGGAA 729
|.|||||||||.|.|||..|||||||..||..||.|||||.||||||.||
BL03103___yfl 446 TTAAAGCCAATCATGATAAGCCGAATGCCGAATACTTCGGAAAAGCGAAA 495
BSNT_01291___ 730 GGAAAAAACGTCATTTACGTTTCACTTGAATCTTTGCAGTCATTTATCAT 779
||.|..|||||..|||||.|||||||.|||||..|.|||.|.||..|.||
BL03103___yfl 496 GGCATGAACGTGGTTTACATTTCACTGGAATCACTTCAGACCTTCCTGAT 545
BSNT_01291___ 780 CGACTATAAAATTGACGGCAAAGAAGTGACACCGTTCTTAAATAAACTGG 829
|||.|||||..|.||||||||||||||.||.||.|||||||||..|||||
BL03103___yfl 546 CGATTATAAGCTCGACGGCAAAGAAGTCACGCCATTCTTAAATTCACTGG 595
BSNT_01291___ 830 CACATGATAACGAAACGTTCTACTTTGATAACTTTTTCCACCAAACGGGA 879
|.||.||.||.||||||||.||.||.||||||||||||||||||||.|||
BL03103___yfl 596 CGCACGACAATGAAACGTTTTATTTCGATAACTTTTTCCACCAAACCGGA 645
BSNT_01291___ 880 CAAGGCAAAACATCTGATGCTGAATTTATGATGGAAAACTCTCTGTACCC 929
|||||.|||||.||.||.||.||||||||||||||.|||||.|||||.||
BL03103___yfl 646 CAAGGTAAAACGTCCGACGCCGAATTTATGATGGACAACTCGCTGTATCC 695
BSNT_01291___ 930 GCTGGCTCAAGGTTCAGTTTTCGTAAACAAAGCGCAAAACACGCTGCAAT 979
..|..|.|||||.|||||.|||.|.||.||||||||||||||||||||.|
BL03103___yfl 696 TTTATCGCAAGGGTCAGTGTTCATTAATAAAGCGCAAAACACGCTGCAGT 745
BSNT_01291___ 980 CCGTTCCGGCGATTCTGAAGTCT-AAGAATTACACATCTGCTACTTTCCA 1028
|.|.||||||.|||.|||||||| ||| ..||.|||||.||..|.|||||
BL03103___yfl 746 CGGCTCCGGCCATTTTGAAGTCTCAAG-GCTATACATCAGCGGCGTTCCA 794
BSNT_01291___ 1029 CGGGAAC-ACGCAGACGTTCTGGAACCGTAACGAAATGTACAAAGCGGAA 1077
|||.||| || .|.||||||||||||||.||.||||||||.|||||
BL03103___yfl 795 CGGCAACTAC-AAAACGTTCTGGAACCGCAATGAAATGTATAAAGC---- 839
BSNT_01291___ 1078 GGCAT------TGATAAATTCTTTGATTCTGCCTACTATGACATGAACGA 1121
||| |||.|||||||||||..||.|.||.||.||.||||.|||
BL03103___yfl 840 --CATCGGTTATGACAAATTCTTTGACGCTACGTATTACGATATGAGCGA 887
BSNT_01291___ 1122 AGAAAACACGAAAAACTACGGCATGAAAGACAAACCGTTCTTCAAAGAAT 1171
|||.||.||||||||||||||..|||||||.|||||||||||..||||||
BL03103___yfl 888 AGATAAAACGAAAAACTACGGGTTGAAAGATAAACCGTTCTTTGAAGAAT 937
BSNT_01291___ 1172 CAATGCCGCTGCTGGAAAGCCTGCCGCAGCCGTTCTATACGAAGTTCATT 1221
|||||||||||.||.||||||||...||||||||||||||||||||.||.
BL03103___yfl 938 CAATGCCGCTGTTGAAAAGCCTGAAACAGCCGTTCTATACGAAGTTTATC 987
BSNT_01291___ 1222 ACCCTGTCCAACCACTTCCCATTCGGAATGGATGAGGGAGATACAGACTT 1271
|||||.||.|||||.||.||.||||..||||||||.||.|||||||||||
BL03103___yfl 988 ACCCTTTCGAACCATTTTCCGTTCGAGATGGATGAAGGCGATACAGACTT 1037
BSNT_01291___ 1272 CCCGGCTGGAGACTTTGGTGACTCTGTCGTCGATAACTACTTCCAGTCAG 1321
|||.||.||.||....||.|||...|||||.||..|.||.||||||||.|
BL03103___yfl 1038 CCCTGCCGGGGATACCGGCGACAGCGTCGTTGACCATTATTTCCAGTCGG 1087
BSNT_01291___ 1322 CCCATTACCTTGATCAGTCCATTGAACAATTCTTCAATGACCTGAAAAAA 1371
||.|.|||.|.||.|||.|..||||||||||||||||.||||||||||||
BL03103___yfl 1088 CCAACTACATGGACCAGGCGCTTGAACAATTCTTCAACGACCTGAAAAAA 1137
BSNT_01291___ 1372 GACGGGTTATATGATAAATCGATTATTGTGATGTACGGAGACCACTACGG 1421
|.|||..|.||||||||..|||||.|.||.||||||||.|||||||||||
BL03103___yfl 1138 GCCGGACTGTATGATAATACGATTGTCGTCATGTACGGGGACCACTACGG 1187
BSNT_01291___ 1422 CATCTCTGAAAACCACAATAAAGCGATGGCGAAAGTGCTTGGCAAGGATG 1471
.||.||||||||.|||||.|||||||||||.|||||..|.|||| |.|
BL03103___yfl 1188 TATTTCTGAAAATCACAACAAAGCGATGGCCAAAGTTTTGGGCA---AAG 1234
BSNT_01291___ 1472 AAATCACTGATTACGACAATGCCCAGCTTCAACGGGTGCCGCTCTTTATC 1521
|.|||||....||.||.||.|||||..|.|||.||||||||||.||.|||
BL03103___yfl 1235 ACATCACACCATATGAAAACGCCCAATTGCAAAGGGTGCCGCTGTTCATC 1284
BSNT_01291___ 1522 CACGCTGCC-GGCGTGAAGGGCGAGAAAGTTCATAAATATGCCGGAGACG 1570
||||| ||| ||.||.|||||....|||...||||||||.|.|||.||.|
BL03103___yfl 1285 CACGC-GCCTGGGGTCAAGGGAATCAAATCCCATAAATACGGCGGCGAAG 1333
BSNT_01291___ 1571 TTGATGTGGCTCCTACCATTCTGCATCTGCTCGGAGTGGATACGAAGGAC 1620
|.|||||.||.||||||.|.||.|||.||.|.||.|||.|||||||.||.
BL03103___yfl 1334 TCGATGTAGCCCCTACCCTGCTTCATTTGATGGGCGTGAATACGAAAGAT 1383
BSNT_01291___ 1621 TATCTGATGTCCGGTTCTGATATTTTATCGAAAGAACACCGTGAAGTGAT 1670
||.||||||..||||||.||..||.|.||....||||||||||||.|.||
BL03103___yfl 1384 TACCTGATGAGCGGTTCAGACCTTCTGTCACCGGAACACCGTGAAATTAT 1433
BSNT_01291___ 1671 TCCGTTCCGCAACGGAGACTTTATTTCACCGAAGTACACGAAAATATCCG 1720
|||||||||||||||.||.||..|.||.|||.|.||.|||||||....||
BL03103___yfl 1434 TCCGTTCCGCAACGGCGATTTCGTCTCTCCGGAATATACGAAAACGAACG 1483
BSNT_01291___ 1721 GTAAGTATTACGACACGAAAAC---------------CGGAAAAGAACTC 1755
|.||.||.||.||||||||||| ||.||||||..||
BL03103___yfl 1484 GAAACTACTATGACACGAAAACAGGAGAGCTACTGAACGAAAAAGACATC 1533
BSNT_01291___ 1756 GATGAATCCGAAGTCGACAAGTCAGAAGACTCGCTCGTCAAGAAGGAACT 1805
| |||||| ||| || ||||| |..|||.||.||.|||||
BL03103___yfl 1534 G----ATCCGA-----ACA--TC-GAAGA---GGCCGTGAAAAAAGAACT 1568
BSNT_01291___ 1806 TGAAATGTCCGATAAAATCATAAACGGAGACCTGCTGCGGTTCTACGAGC 1855
.||||||||.|||||||||.|..|||||||..|||||||.|||||..|.|
BL03103___yfl 1569 CGAAATGTCGGATAAAATCGTCGACGGAGATTTGCTGCGCTTCTATAAAC 1618
BSNT_01291___ 1856 CGAAAGGTTTTAAGAAGGTGAATCCTTCTGATTATGATTACAC------- 1898
||||.||.|||||...|.|.|||||....||.||.||.||.||
BL03103___yfl 1619 CGAAGGGCTTTAAAGCGATCAATCCGAGCGACTACGACTATACCAACCAC 1668
BSNT_01291___ 1899 ------AAAACATGACGAA---GATTCTTCCGAAACGTCAAAGGATAACG 1939
|||||||.| ||| |||.|..|..|||| ||||
BL03103___yfl 1669 AATCCGAAAACATCA-GAATCTGATGCGGCGCAAAC----------AACG 1707
BSNT_01291___ 1940 AA----GAT------AAATAA 1950
|| ||| .|||||
BL03103___yfl 1708 AAATCGGATTCCGGACAATAA 1728
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.