Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01289 and BL03102

See Amino acid alignment / Visit BSNT_01289 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:48
# Commandline: needle
#    -asequence dna-align/BSNT_01289___yflG.1.5803.seq
#    -bsequence dna-align/BL03102___yflG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01289___yflG-BL03102___yflG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01289___yflG-BL03102___yflG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01289___yflG
# 2: BL03102___yflG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 776
# Identity:     584/776 (75.3%)
# Similarity:   584/776 (75.3%)
# Gaps:          49/776 ( 6.3%)
# Score: 2232.5
# 
#
#=======================================

BSNT_01289___      1 ATGATTGTAACAAACGATCAAGAATTAGAAGGCCTGAAAAAAATCGGAAG     50
                     .||||||||||.||.||.|||||..|.|||||.||.||.||||||||.||
BL03102___yfl      1 GTGATTGTAACGAATGACCAAGAGCTGGAAGGGCTCAAGAAAATCGGCAG     50

BSNT_01289___     51 AATCGTCGCGCTTGCGCGTGAAGAAATGAAGCGGAAGGCAGAGCCCGGCA    100
                     |||||||||..|.||..|.||.|||||||||...||.||||..|||||||
BL03102___yfl     51 AATCGTCGCTTTAGCCAGGGAGGAAATGAAGGCAAAAGCAGCTCCCGGCA    100

BSNT_01289___    101 TGAGCACAAAAGACCTTGACCTTATCGGAAAAGCTGTGCTTGATGAGCAC    150
                     |||||||||||||.||.||.||.||||||||||..||||||||.|..||.
BL03102___yfl    101 TGAGCACAAAAGAGCTGGATCTCATCGGAAAAGAAGTGCTTGAAGCCCAT    150

BSNT_01289___    151 GGCGCCGTTTCAGCTCCTGAGAAGGAATACGATTTTCCAGGCGTGACATG    200
                     |||||||..||.|||||.||.||.||||||||.||.||.||...|||.||
BL03102___yfl    151 GGCGCCGCATCGGCTCCGGAAAAAGAATACGACTTCCCGGGAACGACGTG    200

BSNT_01289___    201 CATCAGCGTAAATGATGAAGTGGCTCACGGCATACCAAGCACATCCAAAA    250
                     ||||||.||.||.||||||||.||.||||||||.||||||..|||||.||
BL03102___yfl    201 CATCAGTGTGAACGATGAAGTCGCCCACGGCATCCCAAGCGAATCCAGAA    250

BSNT_01289___    251 TTTTAAAAGCAGGGGACCTTG-TCAACATCGACATCTCCGCTGAATTTGG    299
                     |||||||||.|||||| .||| ||||||||||||||||||||||||||||
BL03102___yfl    251 TTTTAAAAGAAGGGGA-TTTGATCAACATCGACATCTCCGCTGAATTTGG    299

BSNT_01289___    300 CGGCTTCTATTCCGACACAGGCATCTCATTTGTGCTCGGTGAAGGAGAAG    349
                     |||||.||||||.||.||.|||||.||.|||||.|||||..||||.||.|
BL03102___yfl    300 CGGCTACTATTCTGATACGGGCATTTCTTTTGTACTCGGAAAAGGCGATG    349

BSNT_01289___    350 AACGCCTTCATAAGCTTTGCCAATGCGCGGAAAACGCTTTTCAAAAGGGG    399
                     ||...||.||.||||||||||||.|.|||||||.||||||||||||||||
BL03102___yfl    350 AAATGCTGCACAAGCTTTGCCAAAGTGCGGAAAGCGCTTTTCAAAAGGGG    399

BSNT_01289___    400 CTTCAGCAGGCAAAAGCG----GGCAAGCGCCAAAACCAGATCGGAAGAG    445
                     |||..||||||    |||    ||||||...||||||||.|||||.||||
BL03102___yfl    400 CTTTTGCAGGC----GCGCGCCGGCAAGAAACAAAACCAAATCGGCAGAG    445

BSNT_01289___    446 CCGTTTATCATGAAGCACGCTCTCAA-------GGCTTTACCGTCATCAA    488
                     ||||.||..||||||||       ||       ||.|||||||||||.||
BL03102___yfl    446 CCGTATACAATGAAGCA-------AAAGCAAACGGATTTACCGTCATTAA    488

BSNT_01289___    489 AACCCTGACCGGCCACGGAATCGGCCGAAGCCTGCATGAAGCGCCGAATC    538
                     ||.||||||.||.|||||.||.||..|.|.|||.|||||||||||.||.|
BL03102___yfl    489 AAACCTGACGGGACACGGGATTGGAAGGAACCTCCATGAAGCGCCCAACC    538

BSNT_01289___    539 ACATCATGAACTATTATGATCCGTTTGATAACGCACTGTTCAAAAATGGC    588
                     |.|||.|.||.||.|||||.|||||||||||.||.||.||.|||||.||.
BL03102___yfl    539 ATATCTTAAATTACTATGACCCGTTTGATAATGCGCTCTTTAAAAACGGA    588

BSNT_01289___    589 ACAGTCATCGCGCTTGAACCGTTTATTTCAACGAAAGCAGAA---ACGAT    635
                     ||.||||||||.|||||.||||||.||||.||.|||||||||   ||.| 
BL03102___yfl    589 ACCGTCATCGCCCTTGAGCCGTTTGTTTCCACAAAAGCAGAACATACCA-    637

BSNT_01289___    636 TGTTGAAGCTGGAGACGGCTGGACGTTCAAGACGCCGGATAAAAGCATGG    685
                       |.|||||.||||||||||||||.|||||.|||||.||....|||.|.|
BL03102___yfl    638 --TCGAAGCCGGAGACGGCTGGACATTCAAAACGCCTGACGGCAGCTTTG    685

BSNT_01289___    686 TTGCCCAAGTTGAACACACGATCGTCATCACAAAAGATGAACCGATTAT-    734
                     |.||.||..|.||.||.||||||||||||||.|||.|.||||||||.|| 
BL03102___yfl    686 TGGCGCAGATCGAGCATACGATCGTCATCACGAAAAACGAACCGATCATT    735

BSNT_01289___    735 ---------CCTGAC-GAAACTGTAA    750
                              |.|||| ||        
BL03102___yfl    736 TTAACACAGCTTGACTGA--------    753


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