Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01326 and BL03085
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:51
# Commandline: needle
# -asequence dna-align/BSNT_01326___yfkE.1.5803.seq
# -bsequence dna-align/BL03085___yfkE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01326___yfkE-BL03085___yfkE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01326___yfkE-BL03085___yfkE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01326___yfkE
# 2: BL03085___yfkE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1078
# Identity: 793/1078 (73.6%)
# Similarity: 793/1078 (73.6%)
# Gaps: 44/1078 ( 4.1%)
# Score: 2836.5
#
#
#=======================================
BSNT_01326___ 1 ATGAATCGTATCTTTTTTATTTTAG----TGGCGGCCGGTGTTCCGCTTT 46
||||..|| ||||||.||||.| ||||.||.||||||||.||||
BL03085___yfk 1 ATGAGCCG----TTTTTTCTTTTGGATGATGGCTGCGGGTGTTCCACTTT 46
BSNT_01326___ 47 CTGTGATTGGCAGTTTGATGCATTGGCCTTCCGC-GGTTCTATTTGCAGT 95
||||....||.||..|..|||||||| |||| ||||.|||| ||
BL03085___yfk 47 CTGTCGCAGGGAGCCTTCTGCATTGG----CCGCAGGTTTTATT----GT 88
BSNT_01326___ 96 T-------TATTGCGTGACGATTATCGCGCTTGCAAGCTATATGGGGAGG 138
| ||.|||.|||||||.|||||||||||||||||||||||.||.
BL03085___yfk 89 TCATCATATACTGCCTGACGATCATCGCGCTTGCAAGCTATATGGGAAGA 138
BSNT_01326___ 139 GCGACAGAATCACTGTCCATCATTGCAGGACCGCGTATCGGCGGTTTGTT 188
||.||.|||...||..|.||||||||.||||||.|.|||||.||..|.||
BL03085___yfk 139 GCCACCGAAAGCCTTGCGATCATTGCGGGACCGAGGATCGGAGGCCTTTT 188
BSNT_01326___ 189 GAATGCCACCTTCGGGAATGCGGTGGAGCTGATTATTTCCCTTTTTGCAT 238
.|||||.||.|||||.||.||.||.||||||||.|||||..||||.||.|
BL03085___yfk 189 AAATGCGACGTTCGGAAACGCCGTTGAGCTGATCATTTCGATTTTCGCGT 238
BSNT_01326___ 239 TAAAAGAAGGCCTGACAGGAATCGTGCTTGCCTCTTTAACCGGTTCAGTG 288
|....|||||.||||..|||||.|||||.||.||..|.||.||.||.||.
BL03085___yfk 239 TGCGGGAAGGACTGATCGGAATTGTGCTCGCATCGCTGACAGGATCTGTC 288
BSNT_01326___ 289 CTGGGGAACCTGTTGCTGGTAGCGGGCCTATCGTTTTTTGTCGGCGGTTT 338
.||||.|||||..|.|||||.||.||.||.||||||||..||||.||..|
BL03085___yfk 289 TTGGGCAACCTTCTCCTGGTCGCCGGGCTTTCGTTTTTCATCGGGGGCCT 338
BSNT_01326___ 339 AAAATATAAGCGGCAGGAATTTAATATCCATGATGCCCGCCATAACTCCG 388
.|||||||||||.||||||||.||..|..|||||||..|.||.||.||.|
BL03085___yfk 339 GAAATATAAGCGCCAGGAATTCAACGTGTATGATGCGAGACACAATTCAG 388
BSNT_01326___ 389 GGCTTCTGATTTTTGCCATCATTGTCGCCTTTGTGATTCCGGAGGTATTC 438
|.||.||.||.||.||..|.||||||||.||.||.||.||.||.||.||.
BL03085___yfk 389 GTCTGCTCATGTTCGCGGTGATTGTCGCTTTCGTTATCCCTGAAGTGTTT 438
BSNT_01326___ 439 TCTGTTGGTATGGGAAACGCC-AGCAAGC--TCAATTTAAGCATCGGCAT 485
||.|.||..|||..|.| ||| ||.|||| ||.| |.|||.|||||||
BL03085___yfk 439 TCAGCTGAAATGACAGA-GCCGAGGAAGCTGTCGA--TGAGCGTCGGCAT 485
BSNT_01326___ 486 CAGCATCATTATGATTCTGTTGTATGTGGCGGCGCTGTACTTTAAACTTG 535
|||||||||.||||||.||.|.||..||||.||.||.||.||.||.||||
BL03085___yfk 486 CAGCATCATCATGATTTTGCTTTACCTGGCTGCACTTTATTTCAAGCTTG 535
BSNT_01326___ 536 TCACGCATCGGGGCGTTTATCAGCCGAAT---AATGCCGCTCAGTCTGAA 582
|||..||.||.||.|||||.|||.||||| |||| ||...|||
BL03085___yfk 536 TCAGCCACCGCGGGGTTTACCAGACGAATCAAAATG------AGCAGGAA 579
BSNT_01326___ 583 GAA---GAGGAAGAGCCGGAATGGTCAGGGAAGGTTGCGACGATTG-TCT 628
||| .|.|||||||||||||||||.||.|||...||.|| |||| |||
BL03085___yfk 580 GAATCGCATGAAGAGCCGGAATGGTCGGGAAAGCGCGCAAC-ATTGATCT 628
BSNT_01326___ 629 TGTTTGCGGCAACGATTGTGGTTGCATACATATCCGAAAACCTGGTCCAT 678
|.|||..||||||..|||..||.||.|||||.|||||..||||.||||||
BL03085___yfk 629 TATTTTTGGCAACTGTTGCCGTCGCCTACATTTCCGAGCACCTCGTCCAT 678
BSNT_01326___ 679 ACCTTTCACTCGGTTGCTGAACAGTTCGGGTGGAGCGAGCTGTTTATCGG 728
||.|||.|..||||.||.|||||.|||||.|||...|||||.||.|||||
BL03085___yfk 679 ACGTTTGATACGGTGGCCGAACAATTCGGCTGGTCGGAGCTTTTCATCGG 728
BSNT_01326___ 729 GGTCATCATCGTGGCGATTGTAGGAAATGCGGCGGAGCACGCGTCAGCGA 778
|||||||||.||.|||||.||.|||||.|||||.|||||.||.||.||..
BL03085___yfk 729 GGTCATCATTGTCGCGATCGTCGGAAACGCGGCAGAGCATGCTTCCGCCG 778
BSNT_01326___ 779 TTATTATGGCCTTCAAAAATAAAATGGACATTGCGGTTGAAATTGCAGTC 828
|.||||||||||..||..|.||||||||..|.||||||||||||||..||
BL03085___yfk 779 TCATTATGGCCTATAAGGACAAAATGGATGTCGCGGTTGAAATTGCGATC 828
BSNT_01326___ 829 GGCTCTACGCTGCAGATCGCTATGTTTGTCGCACCGGTTCTCGTCATCTG 878
||.||.|||||.||||||||.|||||||||||.||.|||||.||||||.|
BL03085___yfk 829 GGATCAACGCTTCAGATCGCGATGTTTGTCGCCCCTGTTCTTGTCATCAG 878
BSNT_01326___ 879 TTCTATCTTTTTTCCGACAAGCATGCCGCTTGTATTTACATTGCCTGAGC 928
.|||.|.||||||||.||.|||||||||||.||.|||||.|||||.||||
BL03085___yfk 879 CTCTTTGTTTTTTCCAACGAGCATGCCGCTCGTCTTTACCTTGCCGGAGC 928
BSNT_01326___ 929 TCGTCGCGATGGTATCAGCGGTTCTCTTGATGATCGCGATTTCGAATGAC 978
|.|||||.||||..||.||.||.||.|||||||||...|||||.||.|||
BL03085___yfk 929 TGGTCGCCATGGCTTCCGCCGTCCTTTTGATGATCATCATTTCCAACGAC 978
BSNT_01326___ 979 GGGGATTCCAACTGGTTTGAAGGGGCGACACTGCTTGCTGCATATGTCAT 1028
|||||..|.||||||||||||||.||||||.||||.||.||.|||.||||
BL03085___yfk 979 GGGGACACGAACTGGTTTGAAGGCGCGACATTGCTGGCCGCTTATATCAT 1028
BSNT_01326___ 1029 TATGGCGATCGGCTTTTTCCTTCTTTAA 1056
.||||..|||||.|||||||||||||||
BL03085___yfk 1029 CATGGGAATCGGTTTTTTCCTTCTTTAA 1056
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