Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01321 and BL03082
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence dna-align/BSNT_01321___yfkI.1.5803.seq
# -bsequence dna-align/BL03082___yfkI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01321___yfkI-BL03082___yfkI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01321___yfkI-BL03082___yfkI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01321___yfkI
# 2: BL03082___yfkI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 220/392 (56.1%)
# Similarity: 220/392 (56.1%)
# Gaps: 112/392 (28.6%)
# Score: 597.5
#
#
#=======================================
BSNT_01321___ 1 ATGAACAACGAACG---TTTAATGCTGAAAGGGATAT--TTCTCGGAGCT 45
|||||.|||||.|| |||.|| |.||| |||| |.|||||.|||
BL03082___yfk 1 ATGAAAAACGACCGCGTTTTCAT-CAGAA----ATATCCTCCTCGGCGCT 45
BSNT_01321___ 46 GCGGCAGGCGCGGCGTTA--TCACTGCTCCATAAGCCGACAAGACAGGCG 93
.|||..||.||| |||| ||||||||.||.||.|||||.||..|.|||
BL03082___yfk 46 TCGGTCGGGGCG--GTTATGTCACTGCTGCACAAACCGACTAGGGAAGCG 93
BSNT_01321___ 94 TGCGGCATGAGATG----GCTGA---CATGCAAGCATAAA------CTTT 130
||||| || |||.| |.|||||..|.||| ||||
BL03082___yfk 94 TGCGG-------TGCAAAGCTTACCGCGTGCAAAAACAAAGTCCGCCTTT 136
BSNT_01321___ 131 CACTGTATAAAAGCAA--TCCGG--AGCT----------GTTAAAAAACA 166
||.|| |||| .|||| .||| ||.|||.|
BL03082___yfk 137 -ACCGT------GCAAATCCCGGCATGCTCACCGAATGCGTGAAAGA--- 176
BSNT_01321___ 167 CTGTTATCACAAAAGTGGATGAGGCCAAAAAGCT--CGCCCAAACGCTTT 214
||||.||||.||.||||||||||| || ||||.
BL03082___yfk 177 ----------AAAAATGGACGAAGCCAAAAAGCTGACG-------GCTTC 209
BSNT_01321___ 215 CAAA--GGA--AGTCGA-CTTTGTGAACCAGCAGGTGAAAGAGCTGAAGA 259
||.| ||| |.|.|| |||..|.||.||.|||.|.||||||||||||.
BL03082___yfk 210 CATATCGGATGATTTGAGCTTCTTAAATCAACAGATAAAAGAGCTGAAGG 259
BSNT_01321___ 260 AAACAACGCCGCAAGTGATGGAACTCGTGCAAGAAACGAAAGAGCATTTT 309
||||.|||||..|||||||.|..||..|..|.|||||||..||.||.||.
BL03082___yfk 260 AAACGACGCCAAAAGTGATCGGCCTGATTGAGGAAACGAGGGATCACTTC 309
BSNT_01321___ 310 TCA---AAA---AAATGA------------------------ 321
.|| ||| |||.||
BL03082___yfk 310 ACAGCCAAATCCAAAGGACGTACGGAGCCGGAAAAAGAATGA 351
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