Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01303 and BL03070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence dna-align/BSNT_01303___treR.1.5803.seq
# -bsequence dna-align/BL03070___treR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01303___treR-BL03070___treR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01303___treR-BL03070___treR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01303___treR
# 2: BL03070___treR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 747
# Identity: 505/747 (67.6%)
# Similarity: 505/747 (67.6%)
# Gaps: 60/747 ( 8.0%)
# Score: 1568.5
#
#
#=======================================
BSNT_01303___ 1 ATGAAGGTGAATAAATTCATCACAATTTATAAAGACATCGCACAGCAAAT 50
||||||.|.||.||.|..||.|..|||||.|||.|.|||||..|.|||||
BL03070___tre 1 ATGAAGATCAACAAGTATATGATGATTTACAAACAAATCGCGGAACAAAT 50
BSNT_01303___ 51 TGAAGGCGGCCGATGGAAAG------------CGGAGGAGATTCTTCCGT 88
|||| .|||| |||| ||.||.||.||||
BL03070___tre 51 ----------CGAT-CAAAGCATACTGAATGCCGGA-GATATCCTGCCGT 88
BSNT_01303___ 89 CTGAACATGA-GTTGACCGCACAGTACGGTACATCAAGAGAAACGGTCCG 137
|||||.|.|| .||| |||.||||.|||..||.||.||.|||||.||.||
BL03070___tre 89 CTGAAAACGACCTTG-CCGAACAGCACGACACCTCGAGGGAAACCGTTCG 137
BSNT_01303___ 138 AAAGGCGCTTCATATGCTCGCGCAAAACGGTTATATCCAGAAAATCAGGG 187
.||.|||||..|..||||.||.||.|||||.|||||.|||||.||.|..|
BL03070___tre 138 GAAAGCGCTGAACGTGCTTGCTCAGAACGGATATATTCAGAAGATTAAAG 187
BSNT_01303___ 188 GAAAAGGCTCCGTCGTGCTCAATCGTGAAAAAATGCAGTTTCCCGTTTCG 237
|.||.||.||.||||||||..|..|.||.|||||||||||.||.|||||.
BL03070___tre 188 GGAAGGGGTCAGTCGTGCTGCACAGGGAGAAAATGCAGTTCCCGGTTTCC 237
BSNT_01303___ 238 GGCCTTGTCAGCTTCAAGGAGCTCGCGCAAACGCTTGGCAAAGAAACGAA 287
||..|.||||||||.||||||||..|..|||||||.||.|||||.||.|.
BL03070___tre 238 GGTTTGGTCAGCTTTAAGGAGCTTTCAGAAACGCTCGGAAAAGAGACAAG 287
BSNT_01303___ 288 AACAACTGTACACAAATTCGGGCTGGA-GCCTCCGTCAGA-GC---TGAT 332
.||.||.||.||..|.||| ||||.|| ||.|||| || || | ||
BL03070___tre 288 CACGACGGTCCATGAGTTC-GGCTTGACGCATCCG---GACGCATAT-AT 332
BSNT_01303___ 333 CCAAAAACAGCTCCGGGCCAAT--CTG-GATGACGACATCTGGGAAGTCA 379
.|||||.|||||||| ||.| |.| |||||.||..|.|||...||..
BL03070___tre 333 TCAAAAGCAGCTCCG---CACTTCCGGAGATGAAGAGGTATGGCGGGTTG 379
BSNT_01303___ 380 TCAGGTCTAGAAAGATTGACGGGGAACATGTGATTTTGGACAAGGATTAC 429
|||||||..|.||.||..||||.||.|.|.|.||..||||.||.||.||.
BL03070___tre 380 TCAGGTCGCGGAACATCAACGGAGAGCGTATCATCCTGGATAAAGACTAT 429
BSNT_01303___ 430 TTTTTCAGAAAGCATGTCCCTCACCTGACGAAAGAAATTTGTGAAAACTC 479
|||.||.|.||.||.||.||.|...|.|||||||||||.||.||..||||
BL03070___tre 430 TTTATCCGCAAACACGTGCCGCTTTTAACGAAAGAAATATGCGAGGACTC 479
BSNT_01303___ 480 CATATATGAATATATAGAAG------GAGAGCTCGGTCTTTCGATCAGTT 523
.||.|||.||||..|.|||| |.|.||||| || |||||.|
BL03070___tre 480 GATCTATCAATACCTTGAAGATGAATGCGGGCTCG-----TC-ATCAGCT 523
BSNT_01303___ 524 ACGCCCAAAAAGAAATTGTCGCCGAGCCGTGTACGGACGAGGA-CAGAGA 572
|.||.||.||.||||||||.|.||||||.|||||||..||||| || |||
BL03070___tre 524 ATGCTCATAAGGAAATTGTAGTCGAGCCATGTACGGCAGAGGATCA-AGA 572
BSNT_01303___ 573 GCTGCTCGATTTACGCGGCTATGACCATATGGTCGTGGTGAGAAACTACG 622
|....|.|||.|...|||.||.||.||.||.||.||.||||.|||.|.||
BL03070___tre 573 GTATTTGGATCTGAACGGATACGAGCACATTGTGGTCGTGAAAAATTTCG 622
BSNT_01303___ 623 TCTTTTTGGAGGATACCAGTTTGTTTCAATATACGGAAAGCAGACACCGT 672
|.|||.|.||.|||||.|..|||||||||||||||||||||||||||||.
BL03070___tre 623 TTTTTCTTGATGATACGACCTTGTTTCAATATACGGAAAGCAGACACCGC 672
BSNT_01303___ 673 CTCGACAAATTCCGATTTGTTGATTTTGCGCGGCGGGGGAAATGA-- 717
||.||.||||||||.|||||.||||||||..| ..|.||||.|.
BL03070___tre 673 CTTGATAAATTCCGGTTTGTCGATTTTGCAAG--AAGAGAAAAGTAG 717
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