Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01300 and BL03068
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence dna-align/BSNT_01300___treP.1.5803.seq
# -bsequence dna-align/BL03068___treP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01300___treP-BL03068___treP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01300___treP-BL03068___treP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01300___treP
# 2: BL03068___treP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1419
# Identity: 1135/1419 (80.0%)
# Similarity: 1135/1419 (80.0%)
# Gaps: 12/1419 ( 0.8%)
# Score: 4524.0
#
#
#=======================================
BSNT_01300___ 1 ATGGGGGAACTGAACAAATCGGCACGTCAGATTGTCGAAGCAGTCGGCGG 50
|||...||..||||..||||.||.||.|.|||||||||.||.||||||||
BL03068___tre 1 ATGACTGATTTGAATCAATCAGCGCGACGGATTGTCGATGCTGTCGGCGG 50
BSNT_01300___ 51 TGCTGAAAATATTGCAGCGGCAACTCATTGTGTTACACGTTTGCGTTTTG 100
||||||.||.||||||||||.|||.||||||||.||.||||||||.||||
BL03068___tre 51 TGCTGACAACATTGCAGCGGTAACCCATTGTGTAACGCGTTTGCGATTTG 100
BSNT_01300___ 101 CTTTAATAGATGAAAGCAAGGTTGACCAAGAGATGCTTGATCAAATTGAT 150
|.||..|.|||||||||||.||..|.||||||.||||.||.|||||.|||
BL03068___tre 101 CATTGCTCGATGAAAGCAAAGTCAATCAAGAGGTGCTGGAGCAAATAGAT 150
BSNT_01300___ 151 GCGGTAAAGGGATCATTCTCGACAAACGGACAGTTTCAGGTCGTAATCGG 200
|..||.||.|||||.||.|||||.|||||.||.|||||.||.||.|||||
BL03068___tre 151 GTTGTCAAAGGATCGTTTTCGACTAACGGCCAATTTCAAGTGGTGATCGG 200
BSNT_01300___ 201 CCAGGGAACTGTCAACAAAGTATATGCTGAACTGGTTAAGGAAACGGGGA 250
|||.|||||.||||||||.||.||.||.||.|||||.||||.|||.||.|
BL03068___tre 201 CCAAGGAACGGTCAACAATGTGTACGCGGAGCTGGTGAAGGCAACAGGAA 250
BSNT_01300___ 251 TTGGCGAGTCAACAAAGGATGAAGTGAAGAAGGCCTCAGAAAAAAATATG 300
|.|||||.||..||||||||||.||.|||||.||||||||.|||||||||
BL03068___tre 251 TCGGCGAATCGTCAAAGGATGATGTTAAGAAAGCCTCAGAGAAAAATATG 300
BSNT_01300___ 301 AATCCTTTGCAGCGTACTGTGAAAACGCTTGCAGACATTTTTATTCCAAT 350
||||||||.||||||.|.|||||||||||||||||.||.|||||||||||
BL03068___tre 301 AATCCTTTACAGCGTGCCGTGAAAACGCTTGCAGATATATTTATTCCAAT 350
BSNT_01300___ 351 ATTGCCTGCGATTGTCACGGCGGGTCTTTTAATGGGGATCAATAACATTT 400
||||||.|||||||||||.||.||.||..|.|||||||||||.||.||..
BL03068___tre 351 ATTGCCGGCGATTGTCACTGCCGGGCTGCTGATGGGGATCAACAATATCC 400
BSNT_01300___ 401 TAACGGCGGAAGGCATTTTCTTCAGCACAAAATCGATTGTGCAGGTTTAT 450
|.|||||..|||.|||||||||||||..||||||.||.||..|.||.|||
BL03068___tre 401 TGACGGCTCAAGACATTTTCTTCAGCGGAAAATCAATCGTTGAAGTCTAT 450
BSNT_01300___ 451 CCGCAGTGGGCGGATCTTGCTAATATGATTAACCTGATTGCAGGCACGGC 500
|||||.|||||||||||.|||||||||||||||.||||.||.||.||.||
BL03068___tre 451 CCGCAATGGGCGGATCTCGCTAATATGATTAACTTGATCGCGGGGACTGC 500
BSNT_01300___ 501 CTTTACGTTTTTGCCTGCGTTAATCGGATGGTCTGCCGTCAAGCGGTTCG 550
.||..|.|||.|.||||||.|||||||.|||||.||||||||||||||.|
BL03068___tre 501 TTTCGCATTTCTCCCTGCGCTAATCGGCTGGTCGGCCGTCAAGCGGTTTG 550
BSNT_01300___ 551 GCGGCAATCCGCTTCTCGGCATTGTGCTCGGAGTTATGCTCGTGCATCCT 600
||||.||||||||.||||||||.||||||||.||.|||||.|||||.|||
BL03068___tre 551 GCGGAAATCCGCTGCTCGGCATCGTGCTCGGCGTCATGCTTGTGCACCCT 600
BSNT_01300___ 601 GATTTGCTGAATGCGTGGGGATATGGCGCGGCAGAACAAAGCGGAGAGAT 650
||||||.|.||.||.||||||||.||.||.||.||.||||||||||||||
BL03068___tre 601 GATTTGTTAAACGCCTGGGGATACGGGGCTGCGGAGCAAAGCGGAGAGAT 650
BSNT_01300___ 651 CCCGGTATGGAATCTATTCGGCCTAGAGGTGCAGAAAGTCGGCTATCAGG 700
.||.||.||||||.|||||||..|.||.||||||||.||||||||.||||
BL03068___tre 651 TCCTGTCTGGAATTTATTCGGTTTGGAAGTGCAGAAGGTCGGCTACCAGG 700
BSNT_01300___ 701 GCCAGGTACTCCCAATTTTGCTTGCTTCTTATATGCTGGCGAAGATTGAG 750
|.|||||.||.||.||||||||.|||||||||.|||||||.||.||||||
BL03068___tre 701 GGCAGGTGCTTCCCATTTTGCTCGCTTCTTATTTGCTGGCAAAAATTGAG 750
BSNT_01300___ 751 GTATTTTTAACAAAACGCACACCTGAGGGCATACAGCTGCTCGTTGTCGC 800
...|||||.|||||.||.||.||||||.||||.|||||.||.|||||.||
BL03068___tre 751 CGCTTTTTGACAAAGCGGACGCCTGAGAGCATTCAGCTCCTTGTTGTGGC 800
BSNT_01300___ 801 ACCAATTACGCTTCTCTTAACAGGATTTGCCTCTTTTATCATTATCGGCC 850
|||.||||||||.||..|.|||||.|||||.||.|||||..|..|.||.|
BL03068___tre 801 ACCGATTACGCTGCTTGTCACAGGTTTTGCTTCATTTATTGTCCTTGGAC 850
BSNT_01300___ 851 CGATTACATTTGCGATCGGTAATGTACTGACTTCAGGGCTTATCTCGGTG 900
|||||||||||||.|||||.|||||..|.||.|||||.|||||..|.||.
BL03068___tre 851 CGATTACATTTGCCATCGGAAATGTTTTAACATCAGGCCTTATTGCTGTC 900
BSNT_01300___ 901 TTTG----GTTCTTTTGCCGCACTGGGCGGTCTGTTATATGGCGGTTTCT 946
|||| .||| ||||.|||||||||.||||||||.||.||..|.|
BL03068___tre 901 TTTGAACAATTC----GCCGTACTGGGCGGACTGTTATACGGAGGGCTTT 946
BSNT_01300___ 947 ACTCAGCGCTCGTGATTACCGGTATGCATCACACGTTTCTTGCAGTCGAC 996
||.|.||.|||||.||||||||.||||||||.||.||.|||||.||.|||
BL03068___tre 947 ACGCCGCTCTCGTCATTACCGGAATGCATCATACATTCCTTGCCGTTGAC 996
BSNT_01300___ 997 CTGCAGCTCATCGGTTCAAAGCTCGGCGGCACCTTTTTATGGCCGATGCT 1046
||.|||||.|||||.||||||||||||||.||.|||||||||||||||||
BL03068___tre 997 CTTCAGCTGATCGGCTCAAAGCTCGGCGGAACATTTTTATGGCCGATGCT 1046
BSNT_01300___ 1047 GGCGCTTTCTAATATCGCACAAGGTTCGGCCGCTCTAGCCATGATGTTTA 1096
.|||||.||.|||||.|||||||||||.|||||.||.||.||||||||||
BL03068___tre 1047 CGCGCTGTCCAATATTGCACAAGGTTCAGCCGCGCTTGCGATGATGTTTA 1096
BSNT_01300___ 1097 TCGTGAAGGATGAGAAACAAAAAGGCCTCTCCCTCACATCAGGGATTTCT 1146
|.||.||.||||||||.||.||||||||.|||||.|||||.||.|||||.
BL03068___tre 1097 TTGTCAAAGATGAGAAGCAGAAAGGCCTGTCCCTGACATCCGGAATTTCA 1146
BSNT_01300___ 1147 GCTTATCTTGGCATTACAGAGCCTGCCATCTTTGGGGTGAATCTGCGATA 1196
||||||||.||.|||||.||.||.||..|.||.||.||||||||..||||
BL03068___tre 1147 GCTTATCTCGGAATTACCGAACCGGCATTGTTCGGAGTGAATCTCAGATA 1196
BSNT_01300___ 1197 CAGATTCCCGTTTATCATTGCAATGGTCAGCTCTGGCCTGGCCGGAATGT 1246
||||||.|||||..|.||.||.|||.||||.||.||..|.|||||.||||
BL03068___tre 1197 CAGATTTCCGTTCGTGATCGCGATGATCAGTTCGGGGATTGCCGGTATGT 1246
BSNT_01300___ 1247 ATATTTCTTCTCAAGGTGTGCTGGCAAGCTCCGTCGGTGTCGGCGGCGTG 1296
..|||||.||.|||||.||..||||||||||.|||||.|||||||||||.
BL03068___tre 1247 TCATTTCCTCGCAAGGGGTTTTGGCAAGCTCTGTCGGCGTCGGCGGCGTA 1296
BSNT_01300___ 1297 CCGGGGATTTTCTCAATCATGAGCCAGTACTGGGGCGCGTTTGCAATCGG 1346
||.||.||||||||.||.||||||||.||||||||.||||||||.|||||
BL03068___tre 1297 CCTGGAATTTTCTCTATTATGAGCCAATACTGGGGAGCGTTTGCGATCGG 1346
BSNT_01300___ 1347 GATGGCTATTGTATTGATCGTGCCGTTTGCCGGAACATA-CGCGTATGCG 1395
.|||||.||.||.|||||||.|||||||||||||||||| |.| ||.||.
BL03068___tre 1347 AATGGCGATCGTGTTGATCGCGCCGTTTGCCGGAACATATCTC-TACGCA 1395
BSNT_01300___ 1396 AGATTCAAACAT-AAATAA 1413
|.||| |||.|| ||||||
BL03068___tre 1396 AAATT-AAAAATGAAATAA 1413
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