Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01433 and BL03057
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:57
# Commandline: needle
# -asequence dna-align/BSNT_01433___yfhP.1.5803.seq
# -bsequence dna-align/BL03057___yfhP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01433___yfhP-BL03057___yfhP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01433___yfhP-BL03057___yfhP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01433___yfhP
# 2: BL03057___yfhP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 999
# Identity: 741/999 (74.2%)
# Similarity: 741/999 (74.2%)
# Gaps: 30/999 ( 3.0%)
# Score: 2635.5
#
#
#=======================================
BSNT_01433___ 1 ATGGATACGGGCACACATGTCGTTATGGGCATCGCACTGGGCGGTATTGC 50
||||||||.|||||||||||.||.||||||.|.|||||.||.||.||.||
BL03057___yfh 1 ATGGATACTGGCACACATGTTGTCATGGGCGTTGCACTCGGAGGCATCGC 50
BSNT_01433___ 51 GACGCTTGATCCTGTTGTCGGATCAGATCCGGCAATGGCTCACGCTGTTA 100
||||||||||||.|||||||||...||.||..||||||||||.||.||.|
BL03057___yfh 51 GACGCTTGATCCAGTTGTCGGAATGGACCCATCAATGGCTCAAGCCGTGA 100
BSNT_01433___ 101 TGATCGCAACGCTTGCGGGCTCTCAGGCTCCGGATATTGATACTGTGTTA 150
||||.||.||..|.||.||.|||||||||||||||||.|||||.||.||.
BL03057___yfh 101 TGATTGCGACAATCGCCGGATCTCAGGCTCCGGATATCGATACCGTTTTG 150
BSNT_01433___ 151 AAGCTTAAAAACAATGCTGTTTATATAAGGAATCACAGAGGATTTACCCA 200
||..|.||||||||.|||||||||||.|||.|.|||||.|||||.|||||
BL03057___yfh 151 AAATTGAAAAACAACGCTGTTTATATTAGGCACCACAGGGGATTCACCCA 200
BSNT_01433___ 201 TTCAATTCCCGCCGTTTTGTTTTGGTCTGTCATCATCCCGGCGATTCTGT 250
.||.||.|||||.|||.|....|||||..|.||.||.||||..||||| .
BL03057___yfh 201 CTCCATCCCCGCTGTTCTCGCCTGGTCGCTGATGATTCCGGGCATTCT-C 249
BSNT_01433___ 251 AT-TTATTTTATCCTCAGGCCGATTTTCTGCACCTGTGGCTGTGGACACT 299
|| .|.||||||||..|.|||.||.|.||.|||||||||||.|||||.||
BL03057___yfh 250 ATGCTGTTTTATCCCGAAGCCAATCTGCTTCACCTGTGGCTTTGGACCCT 299
BSNT_01433___ 300 GCTG--GCAGTCGTTCTGCATGTCTTTGTTGATATATTCAACGCCTATGG 347
|| ||.||||..||.|||||.||.||.|||||.||.|||||.||.||
BL03057___yfh 300 --TGCCGCGGTCGCGCTTCATGTGTTCGTGGATATTTTTAACGCATACGG 347
BSNT_01433___ 348 AACACAAGCCATTCGTCCGTTTTCGAAAAAATGGGTTGCGCTCGGGCTGA 397
.|||||.||..|..|.||||||||.|..||||||||.||||||||..|||
BL03057___yfh 348 GACACAGGCGGTCAGACCGTTTTCAAGGAAATGGGTAGCGCTCGGCTTGA 397
BSNT_01433___ 398 TTAATACGTTTGATCCGTTTATTTTTATCAGCCATCTGGCAGCTATCGCG 447
|||||||.|||||||||||||||||..||||||||||...|||.|||||.
BL03057___yfh 398 TTAATACATTTGATCCGTTTATTTTCGTCAGCCATCTCATAGCCATCGCC 447
BSNT_01433___ 448 ATTTGGTATGCAGGCGGGAGTCCCGGC-ATCACGTTTCTCAGCT-TATAT 495
.|||||...|||||||.|..||..||| || ||.||| |..||| |.||.
BL03057___yfh 448 TTTTGGCTGGCAGGCGCGCATCAAGGCTAT-ACATTT-TTGGCTCTTTAC 495
BSNT_01433___ 496 ATCATATTGGCAGGCTACTACTTGGTGCGCCTGATCATGCAGCTGAGAAT 545
|||.|.|||||.||.||.||..|||||.|.....||||||||..||.|||
BL03057___yfh 496 ATCGTCTTGGCCGGTTATTATCTGGTGAGGTATTTCATGCAGAGGAAAAT 545
BSNT_01433___ 546 TAAACGGAAGCTTCATGAGATGATTCATGATGAGATCGAAAGCATTATTA 595
.||.|...||||.|.|||.|..|| .|||||.||.|||...||.||||
BL03057___yfh 546 CAAGCATGAGCTCCGTGAAAAAAT---CGATGATATTGAAGAAATCATTA 592
BSNT_01433___ 596 TTTCTCCAACGATGAAATTCAGGCAATGGCGAATCGCAGTGACGACAGCA 645
||||.||.|||||||||||||||||||||||||||||.|| .|.||||
BL03057___yfh 593 TTTCGCCTACGATGAAATTCAGGCAATGGCGAATCGCCGT---CAAAGCA 639
BSNT_01433___ 646 CA---TGCTTTCTATGTAGGAAGAAGCATGGAAGGACATGTCGTGATTCT 692
.| .|||||.||.||.|||.|.||||||||.|||.|.||||||||..|
BL03057___yfh 640 AAATCGGCTTTTTACGTCGGACGGAGCATGGATGGAAACGTCGTGATCGT 689
BSNT_01433___ 693 GGATACATTTAATCGGGTGCCTGTTCCTGAAACCGATGTAATGCATGCGG 742
.||.|||||.||..||||||||.|.||.||.||.|||||.|||.|.||||
BL03057___yfh 690 CGACACATTCAACAGGGTGCCTTTACCGGATACGGATGTGATGAAAGCGG 739
BSNT_01433___ 743 CAAAGCAGGATGATAACATCGCGGCGTTTCTGTCCTTTTCTCCGGTTTAC 792
|.||.||||||.|.|||||..||||||||||.||.||.||.|||||||||
BL03057___yfh 740 CGAAACAGGATAAGAACATTTCGGCGTTTCTTTCGTTCTCACCGGTTTAC 789
BSNT_01433___ 793 CGGTGGGAAGTGGATACGTTTAAAGATCATTATGAGGTGAGATTTATCGA 842
...|||||..|.|||||||.|||.||||||||.||.||..|.||||||||
BL03057___yfh 790 AAATGGGAGATCGATACGTATAAGGATCATTACGAAGTCCGCTTTATCGA 839
BSNT_01433___ 843 CCTGCGTTATCGGAGCAAAGGCCATTATCCGTTTGTCGCAATTGTTCATA 892
.|||||.||.||.||||||||.||.||.||.||.||.||.||.|..||.|
BL03057___yfh 840 TCTGCGATACCGCAGCAAAGGACACTACCCTTTCGTGGCGATCGCACACA 889
BSNT_01433___ 893 TCGGCCATGATCTCACGATCCG--TT-----CGTCCTATACGGGATGGAT 935
|||.|...|| ||||.| || || |.||||||||.||||||||
BL03057___yfh 890 TCGACAGGGA---CACGCT-CGAATTAATCACCTCCTATACCGGATGGAT 935
BSNT_01433___ 936 ATTCAGCGAAGAAAAACTTCAGAAAAAATTAAAGCTCGGCTCTATATAG 984
.||||||||.|||||||||||.||||||||||||||.||||||.|.||.
BL03057___yfh 936 TTTCAGCGAGGAAAAACTTCAAAAAAAATTAAAGCTTGGCTCTGTTTAA 984
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