Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01354 and BL03049

See Amino acid alignment / Visit BSNT_01354 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence dna-align/BSNT_01354___yfjF.1.5803.seq
#    -bsequence dna-align/BL03049___yfjF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01354___yfjF-BL03049___yfjF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01354___yfjF-BL03049___yfjF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01354___yfjF
# 2: BL03049___yfjF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     223/330 (67.6%)
# Similarity:   223/330 (67.6%)
# Gaps:           6/330 ( 1.8%)
# Score: 689.0
# 
#
#=======================================

BSNT_01354___      1 ATGCTGGTTACCATTCTTTTATTTCTCGCGGCGGGGCTTGCCGAAATTGG     50
                     |||.||.|..|.||...|||||||.|...||||||..|.||.|||||.|.
BL03049___yfj      1 ATGATGATCGCAATCGGTTTATTTTTACTGGCGGGTTTGGCTGAAATCGC     50

BSNT_01354___     51 CGGCGGATATCTGGTTTGGCTATGGCTGAGAGAGGCAAAGCCAGCCGGCT    100
                     .|||||.|||||.||.|||||.||||||||.||..|.||.|||....|.|
BL03049___yfj     51 GGGCGGCTATCTCGTATGGCTGTGGCTGAGGGAATCCAAACCATTGTGGT    100

BSNT_01354___    101 ACGGAATTGCCGGGGCGCTGA---TCCTCATTGTATACGGCATTCTTCCG    147
                     ||||..|.|||||.|.|||||   |..|||||   ||||||.|..|.|||
BL03049___yfj    101 ACGGGTTGGCCGGAGGGCTGACTTTAATCATT---TACGGCGTCATCCCG    147

BSNT_01354___    148 ACGTTTCAGTCCTTCCCATCTTTCGGCCGTGTATACGCCGCTTATGGCGG    197
                     .|.||||||.|.||.|||||.|||||.||.||.||.|||||.||.||.||
BL03049___yfj    148 GCTTTTCAGGCATTTCCATCGTTCGGGCGCGTCTATGCCGCGTACGGGGG    197

BSNT_01354___    198 AGTATTCATCGTGCTTGCGGTCCTGTGGGGATGGCTTGTTGACCGGAAAA    247
                     .|||||.||..|.||.||.||.||.|||||.|||||.||.|||...||||
BL03049___yfj    198 CGTATTTATTATTCTGGCTGTGCTTTGGGGGTGGCTGGTCGACAAAAAAA    247

BSNT_01354___    248 CACCTGATCTGTATGACTGGATCGGCGCATTCATTTGTCTCATCGGTGTA    297
                     |.||.||.||.|||||.|||..|||.||..|.||.|||.|...|||.||.
BL03049___yfj    248 CCCCCGACCTCTATGATTGGGCCGGGGCTGTGATCTGTTTAGCCGGCGTC    297

BSNT_01354___    298 TGTGTTATTTTATTTGCGCCGCGCGGATAA    327
                     .|.||.||..|.|..||||||.|.||.|||
BL03049___yfj    298 AGCGTCATGCTTTGGGCGCCGAGAGGCTAA    327


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