Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01441 and BL03042

See Amino acid alignment / Visit BSNT_01441 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:57
# Commandline: needle
#    -asequence dna-align/BSNT_01441___ygaC.1.5803.seq
#    -bsequence dna-align/BL03042___ygaC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01441___ygaC-BL03042___ygaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01441___ygaC-BL03042___ygaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01441___ygaC
# 2: BL03042___ygaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 531
# Identity:     433/531 (81.5%)
# Similarity:   433/531 (81.5%)
# Gaps:           0/531 ( 0.0%)
# Score: 1773.0
# 
#
#=======================================

BSNT_01441___      1 ATGGGCTATCCCAAGGAAGGAGAAACCATTCAAATTCACAGCTATAAGCA     50
                     |||||||.||||||||||||||||||||||||||||||.|||||||||||
BL03042___yga      1 ATGGGCTTTCCCAAGGAAGGAGAAACCATTCAAATTCATAGCTATAAGCA     50

BSNT_01441___     51 CAACGGGCTGATTCATAGAATTTGGAATGAGACAACAATCTTAAAAAGTA    100
                     |||.||||.|||||||.|.||||||||.||.|||||.||.||||||...|
BL03042___yga     51 CAATGGGCAGATTCATCGGATTTGGAACGAAACAACGATTTTAAAAGCAA    100

BSNT_01441___    101 CAGAAATGTGTGTCATCGGAGCCAATGACCGGACGATGGTAACCGAATCA    150
                     |.|||.||||..|||||||.||||||||||||||.|||||.||.|||||.
BL03042___yga    101 CGGAATTGTGCATCATCGGCGCCAATGACCGGACAATGGTCACGGAATCT    150

BSNT_01441___    151 GACGGCCGGACATGGATAACCAGAGAGCCCGCAATCTGTTATTTTCACGC    200
                     |||||||||||||||.|.||..||||||||||.||.||||||||.||.||
BL03042___yga    151 GACGGCCGGACATGGGTGACGCGAGAGCCCGCCATTTGTTATTTCCATGC    200

BSNT_01441___    201 AAGACAATGGTTTAATGTCATCGGGATGCTGAGGGAAGACGGGGTTCATT    250
                     ||..||.||||||||.||||||||.|||||..|.|||||||||.||.|||
BL03042___yga    201 AAAGCAGTGGTTTAACGTCATCGGCATGCTTCGTGAAGACGGGATTTATT    250

BSNT_01441___    251 ATTATTGCAACATCAGTTCTCCGTTTGCCTATGATGGCGAAGCAATTAAA    300
                     |.||||||||||||||.||.||||||||.|..||.|..|||||.||.|||
BL03042___yga    251 ACTATTGCAACATCAGCTCGCCGTTTGCTTTGGACGATGAAGCCATCAAA    300

BSNT_01441___    301 TATATTGATTATGACTTAGATGTTAAGGTTTTTCCTGACATGACCTACAA    350
                     ||.||.||.|||||.||||||||.|||||.||.||.||.|||||.||..|
BL03042___yga    301 TACATCGACTATGATTTAGATGTAAAGGTCTTCCCGGATATGACGTATCA    350

BSNT_01441___    351 TATTCTCGATGAAGACGAATATGATGATCATCGGAAAGCCATGAATTATC    400
                     ||||||.||||||||.||.||.|..||||||...||.||.||||||||||
BL03042___yga    351 TATTCTTGATGAAGATGAGTACGCGGATCATAAAAAGGCGATGAATTATC    400

BSNT_01441___    401 CAAAAGAAATCGACAGTATTTTAAGAGACTACTTAAATACGCTGCTCCAT    450
                     |.||.|||||||||.|.||||||||..||.||||||||||||||||.|||
BL03042___yga    401 CGAAGGAAATCGACGGCATTTTAAGGTACCACTTAAATACGCTGCTGCAT    450

BSNT_01441___    451 TGGATTCACCAGCGTCAGGGACCGTTTGCGCCCGAGTTTGTCGATATGTG    500
                     |||||.|||||..|..|.||.||||||||..|.||.|||.|.|||||.||
BL03042___yga    451 TGGATACACCAAAGAAAAGGCCCGTTTGCATCTGAATTTATTGATATTTG    500

BSNT_01441___    501 GTATGAACGGTATTTGCGCTATACAAAATAA    531
                     |||||||||||||||||..||||||||||||
BL03042___yga    501 GTATGAACGGTATTTGCATTATACAAAATAA    531


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