Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01434 and BL03038
See
Amino acid alignment /
Visit
BSNT_01434 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:57
# Commandline: needle
# -asequence dna-align/BSNT_01434___yfhQ.1.5803.seq
# -bsequence dna-align/BL03038___yfhQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01434___yfhQ-BL03038___yfhQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01434___yfhQ-BL03038___yfhQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01434___yfhQ
# 2: BL03038___yfhQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1154
# Identity: 811/1154 (70.3%)
# Similarity: 811/1154 (70.3%)
# Gaps: 112/1154 ( 9.7%)
# Score: 2833.0
#
#
#=======================================
BSNT_01434___ 1 ATGAACGTACTTGAAGACAAATTAAAACAAAAAGACATACAGCAATTTCG 50
||||..|..||..||.|.||||||.|.||||||.||||..|.|||||||.
BL03038___yfh 1 ATGATGGATCTGCAAAAGAAATTAGAGCAAAAAAACATCAAACAATTTCA 50
BSNT_01434___ 51 CGATGATTTAATCTCATGGTTTGAACGAGAGCAGCGCGTTTTGCCGTGG- 99
.||.||||||||.||.||||.|||.|.|||..|.||.|.|.||||.|||
BL03038___yfh 51 AGAAGATTTAATTTCTTGGTATGAGCAAGAAAAACGGGATCTGCCTTGGC 100
BSNT_01434___ 100 ----AGAGAG-GACCAAGATCCATATAAGGTGTGGGTATCTGAAGTGATG 144
|||.|| ||| ||.||||||||||||||.||.|||||.|||
BL03038___yfh 101 GCTCAGACAGCGAC------CCTTATAAGGTGTGGGTGTCGGAAGTAATG 144
BSNT_01434___ 145 CTGCAGCAAACGAGAGTAGAGACAGTGATTCCTTACTTTCTCCGGTTTGT 194
||.|||||.||||||||.||.||.||||||||||||||...|...|||.|
BL03038___yfh 145 CTTCAGCAGACGAGAGTGGACACGGTGATTCCTTACTTCAACAACTTTAT 194
BSNT_01434___ 195 GGAACAATTCCCGACAGTGGAAGCGCTCGCTGATGCTGATGAAGAAAAGG 244
.|||.|.||.|||||.|||||||||||||||||.||.||.||||||||.|
BL03038___yfh 195 CGAAAAGTTTCCGACCGTGGAAGCGCTCGCTGAAGCCGACGAAGAAAAAG 244
BSNT_01434___ 245 TGCTGAAAGCATGGGAAGGGCTCGGCTATTATTCGCGAGTCAGAAACCTG 294
||||.|||||.||||||||.||.||.||.|||||..|.||..|.|||.||
BL03038___yfh 245 TGCTTAAAGCCTGGGAAGGACTGGGATACTATTCAAGGGTTCGGAACTTG 294
BSNT_01434___ 295 CAAAGCGCGGTAAAAGAAGTGAAACAGGA---ATACGGCGGCATTGT--- 338
||.|||||.||.|..||||| .||.|| ||||||.||..|.||
BL03038___yfh 295 CAGAGCGCTGTCAGGGAAGT---TCACGAACGATACGGGGGTGTGGTCCC 341
BSNT_01434___ 339 TCCTCCAGACGAGAAAGATTTTGGCGGGTTAAAAGGCGTCGGCCCTTATA 388
||||.||.|.||| ||.||.|||.|.||||||||||||||||||||||
BL03038___yfh 342 TCCTTCAAAAGAG---GAATTCGGCAGCTTAAAAGGCGTCGGCCCTTATA 388
BSNT_01434___ 389 CAAAGGGAGCGGTGCTCAGCATTGCCTACAATAAACCCATTCCCGCGGTT 438
|||..||.||||||||.|||||.|||||||||.|.||..|.||||||||.
BL03038___yfh 389 CAAGAGGCGCGGTGCTGAGCATCGCCTACAATCAGCCGGTCCCCGCGGTA 438
BSNT_01434___ 439 GACGGAAATGTGATGCGTGTCATGTCCAGGATTCTATCTATTTGGGATGA 488
|||||||||||.|||||.||||||||..|||||||.||..|.||||||||
BL03038___yfh 439 GACGGAAATGTCATGCGGGTCATGTCACGGATTCTTTCCGTATGGGATGA 488
BSNT_01434___ 489 TATTGCCAAACCAAAAACAAGAACGATCTTTGAA------GACGCCATAC 532
||||||.||.||.|||||.|.|||..|.|||||| |.||
BL03038___yfh 489 TATTGCAAAGCCTAAAACCAAAACCCTGTTTGAAAAAATTGTCG------ 532
BSNT_01434___ 533 GAGCTTTTATTTCCAAAGAAAAACCATCTGAATTTAATCAGGGCTTGATG 582
.|||.||||||||..|.||||||||.||.||.|||||.|||||..|||||
BL03038___yfh 533 AAGCGTTTATTTCTGAGGAAAAACCGTCCGAGTTTAACCAGGGGCTGATG 582
BSNT_01434___ 583 GAGCTTGGAGCCTTGATCTGTACGCCAAAATCACCCTCATGCCTGCTTTG 632
|||||.||.||..|.|||||||||||.|||||.||.||||||||.||.||
BL03038___yfh 583 GAGCTGGGCGCTGTCATCTGTACGCCGAAATCGCCATCATGCCTTCTCTG 632
BSNT_01434___ 633 CCCGGTTC-AGCAGCATTGCTCAGCATTTGAAGAAGGCACTGAACGGGAG 681
||||||.| || ||||.||.||.||.||||.|||||||..||||...|||
BL03038___yfh 633 CCCGGTCCGAG-AGCACTGTTCTGCTTTTGCAGAAGGCTGTGAAAAAGAG 681
BSNT_01434___ 682 CTTCCGGTAAAAAGCAAAAAGAAAAAGCC--CGGGATCAAAACCATGGCC 729
||||||||.|||||||||||||||||.|| ||| |.||||||.|.||.
BL03038___yfh 682 CTTCCGGTTAAAAGCAAAAAGAAAAAACCTTCGG--TAAAAACCCTTGCA 729
BSNT_01434___ 730 GCGATCGTACTGACTGATGAAGACGGACAAGTGTATATCCACAAACGGCC 779
||..||||.||||||||||||||.|||.|..|.||||||||.|||.|.||
BL03038___yfh 730 GCTGTCGTCCTGACTGATGAAGAAGGATACATCTATATCCATAAAAGACC 779
BSNT_01434___ 780 GTCTAAAGGTTTGCTCGCCAACCTGTGGGAATTTCCGAATCTTGAAACAC 829
|.|...||||.|..|.||.|||||.||||||||.||.||....|||||.|
BL03038___yfh 780 GGCATCAGGTCTTTTGGCAAACCTTTGGGAATTCCCAAACACAGAAACGC 829
BSNT_01434___ 830 AAAAAGGGATCAA-AACTGAGCGTGAACAGCTCATTGC----TTTCTTAG 874
|.|||||..|.|| .|| |||||.||.|||| |||| || ||.|
BL03038___yfh 830 AGAAAGGCCTGAAGTAC-GAGCGCGAGCAGC---TTGCGGCGTT--TTTG 873
BSNT_01434___ 875 AAAACGAATATGGC----ATACAAGCTGATATCAGTGATCTGCAAGGTGT 920
||| |||.| ||| |||.|||||||.|||.||...||..||||.||
BL03038___yfh 874 AAA--GAAGA-GGCCGGAATAGAAGCTGAAATCGGTCCGCTCGAAGGAGT 920
BSNT_01434___ 921 AGTCGAGCATGTTTTCACCCACCTGGTATGGAATATTTCAGTGTTTTTCG 970
.||.||||||||.||.||.|||||.||.|||||.|||||.||.|||||||
BL03038___yfh 921 CGTAGAGCATGTGTTTACACACCTTGTCTGGAACATTTCTGTCTTTTTCG 970
BSNT_01434___ 971 GTAAAGTAAAACAAGTGTCGGAT--ACCAG------CA-AGCTGAAAAAA 1011
|.|| ||.|.|| ||| |||.| || |..|.|||||.
BL03038___yfh 971 GGAA--------AACTCTC-GATCAACCGGATGATTCATACTTTAAAAAG 1011
BSNT_01434___ 1012 GTAACGAAAGAAGAGCTCGAACAATTTGCGTTCCCGGTATCACATCAAAA 1061
||.||||||||||||||.|...|||..||.||||||||.||.|||||.||
BL03038___yfh 1012 GTCACGAAAGAAGAGCTTGCTGAATACGCCTTCCCGGTTTCGCATCAGAA 1061
BSNT_01434___ 1062 AATCTGGAAGATG-----GCAGTAGAAGCAGCCGCCATCTCGGCTGCTCC 1106
|||.|||||.||| |.|.|||
BL03038___yfh 1062 AATATGGAATATGTATATGAAATAG------------------------- 1086
BSNT_01434___ 1107 GTAA 1110
BL03038___yfh 1086 ---- 1086
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.