Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01423 and BL03034

See Amino acid alignment / Visit BSNT_01423 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_01423___yfhJ.1.5803.seq
#    -bsequence dna-align/BL03034___yfhJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01423___yfhJ-BL03034___yfhJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01423___yfhJ-BL03034___yfhJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01423___yfhJ
# 2: BL03034___yfhJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     184/290 (63.4%)
# Similarity:   184/290 (63.4%)
# Gaps:          40/290 (13.8%)
# Score: 552.5
# 
#
#=======================================

BSNT_01423___      1 ----ATGAATATGTACATTGAGAAACTGACTAATCTGCTTCTGGAAAAGA     46
                         |.||    ||||.||||.||||||||.|||..||||||.|||||.|
BL03034___yfh      1 GTGGAAGA----GTACTTTGAAAAACTGACAAATGCGCTTCTTGAAAAAA     46

BSNT_01423___     47 ACGAGATGATCAGCTATATACAGGCAAAAACGTGGGTGGAATTGTTATGG     96
                     |..|.|||.|.|||||...|||.||.|.|||.|||||.|||.||.|.|||
BL03034___yfh     47 ATCATATGCTGAGCTACGCACAAGCCAGAACATGGGTTGAACTGCTGTGG     96

BSNT_01423___     97 AGCGATTTCGAAGCAACCTATGCAAAAGCCGGACACGCCTATCA-AGGTG    145
                     .||||||||||.||.||.|.||||||.|||||.|||.|.|| || ||  |
BL03034___yfh     97 GGCGATTTCGAGGCGACATTTGCAAAGGCCGGCCACCCGTA-CAGAG--G    143

BSNT_01423___    146 AAAAAA--TGACTGAAAAAATCGTCACACAATGGATTGAAAACTATGGCG    193
                     ||||.|  ||||.||...|.||||||.|.|.||||||||..||||.|||.
BL03034___yfh    144 AAAAGAGCTGACAGAGCGAGTCGTCAAAGAGTGGATTGAGCACTACGGCA    193

BSNT_01423___    194 GCCAGCTCCACCTTTTTCAAAGCTCCCGTAACGACGTGAATGATTACTTA    243
                     |||||.|.||..|.||||||         ||.|||    |.|..|.||||
BL03034___yfh    194 GCCAGTTGCATTTATTTCAA---------AATGAC----AAGCCTTCTTA    230

BSNT_01423___    244 ----AATC---------AAAGCAGAGGCCTTTTGCATTAA    270
                         .|||         .|..|.|.||.||..|.||||||
BL03034___yfh    231 CCAGGATCTGTTCTCCGGAGCCCGCGGGCTGCTTCATTAA    270


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