Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01418 and BL03033

See Amino acid alignment / Visit BSNT_01418 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_01418___yfhH.1.5803.seq
#    -bsequence dna-align/BL03033___yfhH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01418___yfhH-BL03033___yfhH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01418___yfhH-BL03033___yfhH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01418___yfhH
# 2: BL03033___yfhH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity:     228/337 (67.7%)
# Similarity:   228/337 (67.7%)
# Gaps:          44/337 (13.1%)
# Score: 725.0
# 
#
#=======================================

BSNT_01418___      1 ATGGAGAAACGATACAGTCAAATGACACCTCACGAACT-CAATACC--GA     47
                     |||||||||.||||||||.|||||||..|.|||||||| |   |||  ||
BL03033___yfh      1 ATGGAGAAAAGATACAGTGAAATGACTGCACACGAACTGC---ACCAGGA     47

BSNT_01418___     48 AATCGCATTACTTTCTGAAAAAGCAAGAAAAGCCGAACAGCAT-GGAATC     96
                     |||.||....||..|.|||||.|||||||||||.||||| .|| ||.||.
BL03033___yfh     48 AATTGCGGGTCTGACCGAAAAGGCAAGAAAAGCAGAACA-AATGGGGATT     96

BSNT_01418___     97 ATAAACGAACTGGCAGTGCTCGAACGGAAAATTACGATGGCAAAAGCATA    146
                     .|.||.||||||||.||.|.||||||||||||..|||||||.|||||.||
BL03033___yfh     97 GTGAATGAACTGGCCGTTCACGAACGGAAAATCGCGATGGCGAAAGCCTA    146

BSNT_01418___    147 TTTGCTGAACCCGGAAGATTACTCA---CCGGGA--------GAAACATA    185
                     ..|.||..|.||||..||||  |.|   ||||.|        ||||    
BL03033___yfh    147 CCTTCTTGATCCGGCCGATT--TTAAAGCCGGCAACGTATACGAAA----    190

BSNT_01418___    186 TCGTGTGGAAAACACTGAGGACGA-GTTTACC--ATCAGTTATTTAAATG    232
                          |.|||.|   ||.||.||| |.||.||  |||.|.||||||||.|
BL03033___yfh    191 -----TCGAAGA---TGGGGGCGACGATTTCCATATCCGCTATTTAAACG    232

BSNT_01418___    233 GCGTTTTCGCATGGGGATACAGGACCTCT----TCCCCCCAGCAAGAGGA    278
                     ||||.|||||.|||||||||    |.|||    ||.||..|.||.||.||
BL03033___yfh    233 GCGTATTCGCCTGGGGATAC----CGTCTTTCGTCACCGGATCATGAAGA    278

BSNT_01418___    279 AGCTCTGCCAATCTCAGTATTGCAAGAAAAAGAATAA    315
                     .|||||||||||.||..||||..|||||||.|..|||
BL03033___yfh    279 GGCTCTGCCAATTTCTTTATTAAAAGAAAAGGGCTAA    315


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