Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01417 and BL03032

See Amino acid alignment / Visit BSNT_01417 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_01417___recX.1.5803.seq
#    -bsequence dna-align/BL03032___recX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01417___recX-BL03032___recX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01417___recX-BL03032___recX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01417___recX
# 2: BL03032___recX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity:     581/816 (71.2%)
# Similarity:   581/816 (71.2%)
# Gaps:          45/816 ( 5.5%)
# Score: 1913.5
# 
#
#=======================================

BSNT_01417___      1 ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTT     50
                     |||||.|.|||||||||.||.||..|.||.|||||.|||...||.||..|
BL03032___rec      1 ATGCCATATATTACAAAGATTTCTGCCCAGAAAAACAATGAAGAGCGGGT     50

BSNT_01417___     51 CAATATTTTTCTGGATGATAAATACGCCTTCAGCGTGGACGCGGATGTGC    100
                     ||||||||||||||||||.|||||.||.||||||||.|||..|||.||||
BL03032___rec     51 CAATATTTTTCTGGATGAAAAATATGCGTTCAGCGTCGACCTGGACGTGC    100

BSNT_01417___    101 TCGTGAAATTTGAGCT-CAAGAAGGGAAAAGAACTCGATGATCTTGACAT    149
                     ||||.||.|||||.|| |.| ||.||.|||||.||.|||||.|||||.||
BL03032___rec    101 TCGTCAAGTTTGACCTGCGA-AAAGGCAAAGAGCTTGATGAGCTTGATAT    149

BSNT_01417___    150 CATTGAGATTCAATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGC    199
                     ||||||||||||||||||.||.||.||.||.|||||.|||||....||||
BL03032___rec    150 CATTGAGATTCAATACGGAGACGACGTTAAAAAAGGGTTCAAAAAAGCGC    199

BSNT_01417___    200 TTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTCGAGGACCA-    248
                     |.||.|.|||.||.||.||.|||||.|||||.||.||.||..|.||||| 
BL03032___rec    200 TCGATTATTTGTCATACCGGATGCGCTCGACAAAGGAAGTTCAAGACCAT    249

BSNT_01417___    249 CTTAAAGAAAAAAGAAACCTCGC--CCCCCGTCATTGCGGAAGTCATCCA    296
                     ||| ||||||||||  .|.||||  .|.|||..||..|.|||.|..|.||
BL03032___rec    250 CTT-AAGAAAAAAG--GCGTCGCAGACTCCGCGATCACAGAAATTCTGCA    296

BSNT_01417___    297 TAGGCTTAACGATTACAAGTACTTAAACGACCAGGAATTTGCCGCAGCCT    346
                     ||.||||||.|.|||.||.||.||..||||||..||||||||.||.||.|
BL03032___rec    297 TATGCTTAAAGGTTATAAATATTTGGACGACCGCGAATTTGCGGCTGCAT    346

BSNT_01417___    347 ATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTC    396
                     ||||||||||.||||.||||||.|.|||.||||||||||||||.||.|||
BL03032___rec    347 ATGTCAGCACCCACAGAAAAACGAGCGGCAAAGGCCCTGATGTCTTATTC    396

BSNT_01417___    397 AGAGAGCTAAGAGCGAAGGGAATTGATGACGATAC-AATTAAGGAGGCGC    445
                     ||||||||.|.|..|||.||.||.|||||.|| || .|||.|.||.||||
BL03032___rec    397 AGAGAGCTTAAATTGAAAGGGATCGATGATGA-ACTGATTCATGAAGCGC    445

BSNT_01417___    446 TAAGTTCCTTTTCCTTTGAAGATCA-GACAAGAGAAGCGGTCAAGCATGT    494
                     |.|||||.|||||.|||...||||| |.|.|| |..|||||||||||||.
BL03032___rec    446 TCAGTTCGTTTTCGTTTTCCGATCAGGTCGAG-GCCGCGGTCAAGCATGC    494

BSNT_01417___    495 TGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAAC    544
                     .|||||..|.||.||||||||.||||||||.||..|.|||||....||.|
BL03032___rec    495 GGAAAAAGTACTGAAAAAAGAAAAAAAGCTGTCCTCCAAAGAGACGAAGC    544

BSNT_01417___    545 AGCGCGCCCAGCTGCAGCT--TCAGCGCAAGGGCTTCTCATTTGATGTTA    592
                     ||..|..|.|.|.|||.||  |||  |.|||||.|||||.||.|||||.|
BL03032___rec    545 AGGCCATCGAACAGCACCTTGTCA--GAAAGGGTTTCTCCTTCGATGTCA    592

BSNT_01417___    593 TCAGCGCGGCGATGGATCAG---ATTGAATATGAAAATGATGAAGACACG    639
                     |....||.|||.|   ||||   |..||.||.|||||.||.||.|.|.|.
BL03032___rec    593 TTTCGGCCGCGCT---TCAGGAAACCGATTACGAAAACGACGATGGCGCT    639

BSNT_01417___    640 GAGAAAGAAGCGCTGCGCCTT------CACGCGGAAAAAGCGTTTAGAAA    683
                     ||||.|||||||      |||      ||.|..||||||||..|  |||.
BL03032___rec    640 GAGAGAGAAGCG------CTTGAGAAGCAAGGAGAAAAAGCAAT--GAAG    681

BSNT_01417___    684 A--TACCGCTATGACGGCTCATATGAAAGCG-CCATTAAGGTCAAACAAT    730
                     |  |||.|.||||||||.|||||.|||| || ..||.|||||||||||.|
BL03032___rec    682 AGGTACGGTTATGACGGATCATACGAAA-CGAAAATGAAGGTCAAACAGT    730

BSNT_01417___    731 TTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAG    780
                     .|.|.||..|.||||||||.|||.|.||.||.||.||.|||||..|..|.
BL03032___rec    731 ATCTGTTTAGAAAAGGATTTTCAATTGACTTGATTGACCAATTTTTAGAT    780

BSNT_01417___    781 GAAGA-GGAGTACTGA    795
                     |||.| |||    |||
BL03032___rec    781 GAAAAGGGA----TGA    792


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01417 and BL03032

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
