Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01410 and BL03029

See Amino acid alignment / Visit BSNT_01410 in genome browser / Return to Orthologue table 
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:56
# Commandline: needle
#    -asequence dna-align/BSNT_01410___yfhB.1.5803.seq
#    -bsequence dna-align/BL03029___yfhB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01410___yfhB-BL03029___yfhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01410___yfhB-BL03029___yfhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01410___yfhB
# 2: BL03029___yfhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 954
# Identity:     621/954 (65.1%)
# Similarity:   621/954 (65.1%)
# Gaps:         129/954 (13.5%)
# Score: 1808.5
# 
#
#=======================================

BSNT_01410___      1 ATGAAAGAAGC----AGAGGTATTAAAATATGAAGCATTTACAAGCAGTC     46
                         |.|||||    .||.|||||||.||||||.||||||.|||..|.|.
BL03029___yfh      1 ----ATGAAGCCAATTGAAGTATTAAGATATGACGCATTTTCAAAGACTG     46

BSNT_01410___     47 CCGGCAAAGGAAACCCCGCAGGCGTCGT-TTTGCAGGGAGACGATTATAC     95
                     |.||..|||||||.||.||.|||.|||| .||| |.|.|||||       
BL03029___yfh     47 CGGGTCAAGGAAATCCGGCGGGCATCGTGCTTG-AAGCAGACG-------     88

BSNT_01410___     96 GGAAGAC-------GAGATGCAGATCATAGCTGAACGTGCCGGGTATTCA    138
                     ||..|||       ||||||||||..||.|||||||..||.||.|||...
BL03029___yfh     89 GGTTGACCGATTGGGAGATGCAGAAGATCGCTGAACAGGCAGGCTATAAT    138

BSNT_01410___    139 GAAAC----CTCCTTTATCCGAAAAAGCGAGTCGGCCGATCTT---GAAC    181
                     |||||    .||||....|||    |||||||||||||| |.|   ||  
BL03029___yfh    139 GAAACGGCTTTCCTGCTGCCG----AGCGAGTCGGCCGA-CATAAGGA--    181

BSNT_01410___    182 TCCGTTACTTTACCCCTGGACACGAAATGAATTTGTGCGGTCATGCGACA    231
                     ||||.||||||||.||.||.||.|||||||||||.|||||.||||||||.
BL03029___yfh    182 TCCGCTACTTTACGCCGGGCCATGAAATGAATTTATGCGGACATGCGACT    231

BSNT_01410___    232 GTTGCTTCTCTTTA--CGCATTATGTGAGAAAG--------GAATGCTGG    271
                     ||||||||||||||  ||| ||.|| ||.||||        ||| |||||
BL03029___yfh    232 GTTGCTTCTCTTTATGCGC-TTTTG-GAAAAAGGCGCGATTGAA-GCTGG    278

BSNT_01410___    272 ---AGAGCGGTAAAACGTACAGCATCCAAACGAAAGCGGGTATCCTGCCT    318
                        .||||.|   ||.|       ||.||||.||||||||..||||..||
BL03029___yfh    279 CGCGGAGCTG---AAGG-------TCGAAACAAAAGCGGGCGTCCTTTCT    318

BSNT_01410___    319 GTGAAGATTTCTGAAAAAGATGGC------CGCATTCATATCACGCTTGA    362
                     |||.|   |.|.|....|||.|||      ||..||....|.|||||.||
BL03029___yfh    319 GTGTA---TACCGCCTCAGACGGCAATCGGCGTTTTTTGGTGACGCTGGA    365

BSNT_01410___    363 ACAGGCCTCTCCGCAATTCAAACCATTTACAGGCGATCGGAA-AAAACTT    411
                     .|||||..|.|||...||..|..|.||.||||| .|.|.||| ..||.|.
BL03029___yfh    366 GCAGGCGCCCCCGTGTTTTCAGTCTTTCACAGG-AAGCAGAAGCCAATTG    414

BSNT_01410___    412 GCGGACGCACTGGGTATCACCGATGAAGATTTTCATGAAGACCTT--CCG    459
                     |||||.||.|||||.||||.|||.|..||.|||||||||| |.||  |||
BL03029___yfh    415 GCGGAAGCGCTGGGGATCAGCGAAGCGGACTTTCATGAAG-CATTGCCCG    463

BSNT_01410___    460 ATTGTGTTTGGCAGCACTGGGATATGGACA--GCCATCGTTCCGCTTAAA    507
                      ||||.|.|||.|||||.||.|||||||||  ||  |.||.|||.|.|.|
BL03029___yfh    464 -TTGTTTATGGAAGCACAGGTATATGGACATTGC--TTGTGCCGGTGAGA    510

BSNT_01410___    508 TCATTGGAGGCTTCCAAA-----AAAATGGTGCCAGATAACAAAC--AAT    550
                     ...||||..||     ||     |..|||..|||.|.|  |||.|  |||
BL03029___yfh    511 GATTTGGCCGC-----AATCCGCAGGATGAAGCCCGTT--CAAGCTGAAT    553

BSNT_01410___    551 TTCCGGAAGTGTTAGTTGATCTGCCAAAAGCTTCAGTCCATCCGTTTACC    600
                     |||||.|.||.|||...||..||||...|||.||.|||||.||||||..|
BL03029___yfh    554 TTCCGAACGTTTTAACCGAGATGCCGCGAGCATCTGTCCACCCGTTTTGC    603

BSNT_01410___    601 TTTGAAACCGTCCATCCCGACAGCGACCTGCACGGGCGCCACTTTTCATC    650
                     .|.||.||..||||||..||..||.|.||.|||||..|.||.||||||||
BL03029___yfh    604 CTGGAGACGATCCATCGGGATTGCCAGCTTCACGGCAGGCATTTTTCATC    653

BSNT_01410___    651 CCCGTATTCGGGAACGATTGAAGACCCCGTGACCGGCACAGCATCCGGCG    700
                     .||.|||||.|||||||..|||||.||.||.||.||.||.|||||.||.|
BL03029___yfh    654 GCCTTATTCCGGAACGAGCGAAGATCCTGTCACAGGAACGGCATCAGGAG    703

BSNT_01410___    701 TGATGGGGGCTTATATG-AAACATT----ATGGCAATGCCGAGCAG----    741
                     |||||||.||||||||| ||||.||    |.|| |||.|.|.|.||    
BL03029___yfh    704 TGATGGGCGCTTATATGAAAACGTTCGGAAAGG-AATTCTGTGAAGAGGG    752

BSNT_01410___    742 -CATA--AATTTATC--ATTGAACAAGGGCAGGAAATTGGAAAAGATGGA    786
                      ||.|  .|||| ||  ||.|||||.||.||||||||.||.|||||.|||
BL03029___yfh    753 CCAGACTGATTT-TCAGATCGAACAGGGCCAGGAAATGGGGAAAGACGGA    801

BSNT_01410___    787 AAAGTGGAGATCGAAAT----GAACGAAGCCGGCGGC--CATGTGAAAGT    830
                     ||||||.|.||||||.|    ||||.||    .||||  ||  |||||||
BL03029___yfh    802 AAAGTGAAAATCGAAGTTGCGGAACAAA----ACGGCATCA--TGAAAGT    845

BSNT_01410___    831 GAACATGACAGGAACAGCCG--TTTACTCAGAAACCCGTATTCTTAAATT    878
                     |..||||||||||||.||.|  |||.||  ||||..|..|...||.||.|
BL03029___yfh    846 GCGCATGACAGGAACCGCTGTATTTGCT--GAAAAGCAAAGCTTTGAAGT    893

BSNT_01410___    879 CTAA    882
                     .|||
BL03029___yfh    894 GTAA    897


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