Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02068 and BL03026
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_02068.1.5803.seq
# -bsequence dna-align/BL03026.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02068-BL03026.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02068-BL03026.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02068
# 2: BL03026
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 688
# Identity: 385/688 (56.0%)
# Similarity: 385/688 (56.0%)
# Gaps: 146/688 (21.2%)
# Score: 834.5
#
#
#=======================================
BSNT_02068 1 GTG-CAA-----ACCAAATGGCTGGAACGGGCACAGCGGATTCAAGCGAT 44
.|| ||| |..||.||||||||..|||||.||...||||||||.||
BL03026 1 ATGACAAAGGAGATGAAGTGGCTGGATTGGGCAAAGGAAATTCAAGCTAT 50
BSNT_02068 45 TGCACAGGCTGGGCTTGCTTTTTCCAAGGATGTGTACGACAGGGAGAGGT 94
.||.|||||.||||||||.|.|.|.||.||||..|..||..|.||..|.|
BL03026 51 CGCCCAGGCGGGGCTTGCCTATACAAAAGATGACTTTGATCGTGAACGTT 100
BSNT_02068 95 ACGAAGAGCTAATGAAGCTCAG-TGCAGAAATGATGGTGGATTACTCACA 143
..||..||||.....||||.|| ||| |||||.||.|..|||||..|..|
BL03026 101 TTGAGCAGCTTCGCGAGCTGAGCTGC-GAAATCATCGCCGATTATACGGA 149
BSNT_02068 144 GACGGACAT---TGAAGTTATCACTGATTTAT-----GGAATGGGGAGAG 185
.||||||.| |.||||.| .|..|.|||.| |||||.|
BL03026 150 AACGGACTTCTCTAAAGTGA-AAGAGCTTTTTGCCGGGGAATCG------ 192
BSNT_02068 186 CGGCTATCCGACACCGAAAGCGGATGTTCGCGGCGCAGTATTCCGAGAGA 235
|||||||..||.||.||||..|||||..|.|.||.|.|.||...|||..
BL03026 193 -GGCTATCAAACGCCTAAAGTCGATGTGAGAGCCGTAATTTTTAAAGATC 241
BSNT_02068 236 ATCAGATTTTGCTTGTCCGGGAGAAGCATGATGAGCTG--------TGGT 277
||.||.|..|.|||||||.|||.|| |||.| |||.
BL03026 242 ATAAGCTCCTCCTTGTCCAGGAAAA--------AGCAGACGGCAAATGGG 283
BSNT_02068 278 CGCTGCCGGGTGGATTTTGC-GAGATTGG-TTTATCGCCAGCTGAAAACG 325
|||||||.||.||| |..|| ||.||.|| |||| ||||....||||.||
BL03026 284 CGCTGCCAGGCGGA-TGGGCAGACATCGGCTTTA-CGCCGAAAGAAATCG 331
BSNT_02068 326 TCGTCAAGGAAA----TCAAAGAAGAGTCGGGGTACGATA--CAGAGCCG 369
..||.||.|||| | ||||||.| .|||..||.| || ||.||
BL03026 332 CGGTTAAAGAAACGCTT----GAAGAGAC-AGGTTTGAAAGTCA-AGGCG 375
BSNT_02068 370 TCTCGATTGCTGGCCGTGCTAGACA------GCCATAAACACTCTCATCC 413
..|..|.|.|||||.||..|.||.| ||||.||.||| ||
BL03026 376 CATAAACTTCTGGCGGTCATGGATAAAAAGCGCCACAACCAC------CC 419
BSNT_02068 414 CCC-TCAGCCTT----ATCACTATTATAAAATCTTCATCGCATG-CAGCA 457
||| ||.||||| ||| |||||..|.||.|||.|.|| ||...
BL03026 420 CCCTTCCGCCTTCCACATC-----TATAAGCTGTTTATCTCCTGTCAAAT 464
BSNT_02068 458 TGACGGGCGGGC-AGGGGGAAACAGGGATCGAGAC---GAATCATGCCGC 503
||.||| .||| |||.||||.|.||||..||.|| .||.|.|| |.
BL03026 465 TGTCGG--AGGCAAGGCGGAAGCGGGGACTGAAACACAAAACCTTG--GT 510
BSNT_02068 504 TTTTTTTC--CGGAAGA--CAGCCT------CCCGCCGCTTTCTCCCAAA 543
|||||.|| .|| ||| |.|||| .|.||.|| ||
BL03026 511 TTTTTCTCATTGG-AGAATCTGCCTGAATTATCGGCAGC---------AA 550
BSNT_02068 544 CGAAACACACCCTCACAGCTTAGC-ATG--CTGTTTGA----CTTTTTGC 586
.||| ||.| ||| |.|.|.|| ||||||
BL03026 551 GGAA----------------TACCTATGAACAGATCGAATATCTTTTT-- 582
BSNT_02068 587 GCCATCCGGACAAGAA-----AACGATATT-TGACTAA 618
||.|||.| ||...|||| .||||||
BL03026 583 --------GAAAAGCATGATGAAGTGTATTGCGACTAA 612
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