Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01349 and BL03015
See
Amino acid alignment /
Visit
BSNT_01349 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_01349___acoL.1.5803.seq
# -bsequence dna-align/BL03015___acoL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01349___acoL-BL03015___acoL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01349___acoL-BL03015___acoL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01349___acoL
# 2: BL03015___acoL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1498
# Identity: 936/1498 (62.5%)
# Similarity: 936/1498 (62.5%)
# Gaps: 242/1498 (16.2%)
# Score: 2538.5
#
#
#=======================================
BSNT_01349___ 1 ATGACATTAGCCATTATCGGCGGCGGACCTGCAGGCTATGCGGCTGCGGT 50
.|||||.|.||.|||||.||.||.||||||||.||.||.|.|||.|||.|
BL03015___aco 1 GTGACACTTGCAATTATAGGAGGGGGACCTGCGGGTTACGTGGCGGCGAT 50
BSNT_01349___ 51 TTCCGCGGC-----ACAGCAGGGCAGAAACGTGCTGCTTATTGACAAAGG 95
|.|.||||| |.||||| |||| ||..|.||.|||||..|.||
BL03015___aco 51 TACAGCGGCCAAAAATAGCAG---AGAA--GTCATCCTGATTGAAGATGG 95
BSNT_01349___ 96 CAAGCTTGGAGGGACCTGCCTGAATGAAGGCTGCATCCCGA-CAAAG--- 141
....||.|||||.||.||..|.||||||||.|||||.|||| |||||
BL03015___aco 96 TTCCCTCGGAGGAACGTGTTTAAATGAAGGATGCATACCGACCAAAGCGC 145
BSNT_01349___ 142 -TCTTTGTTAGAAAGCGC--AAACGTTCTTGATAAAATCAAGCATGCCGA 188
|||| |||||||| |.|.|||| ||.|||||.|| || |||.
BL03015___aco 146 TTCTT-----GAAAGCGCAGATATGTTC--GAGAAAATAAA--AT-CCGC 185
BSNT_01349___ 189 CAGC---TTTGGAATCGAACTTCCGGCAGGTGCGATA----------TCA 225
|.|| ||.|||||||..|| |.||| ||||.| |||
BL03015___aco 186 CGGCGCATTCGGAATCGGGCT---GTCAG--GCGAAAGCCCGACGGTTCA 230
BSNT_01349___ 226 GTCGATTGGAGTAAAATG-----CAAAGCCGGAAACAACAGGTTGTCAGT 270
| |.|||| | ||||||||.||...|.|| .|||.|
BL03015___aco 231 G----TGGGAG------GCCGTCCAAAGCCGTAAGAGAGAG---ATCATT 267
BSNT_01349___ 271 CA---GCTTGTCCAAGGCGTTCAGTACCTAATGAAGAAAAATCAAATACA 317
|| |||.|.|...||..||.|.||..|.|||||.||||||.||||..|
BL03015___aco 268 CAGCGGCTCGCCGGGGGTATTGAATATTTGATGAATAAAAATAAAATCAA 317
BSNT_01349___ 318 GGTTGTAAAGGGAACAGCCTCCTTTCTTTCTGAA----AGAAAGCTCTTG 363
||||.|..|.||||.|||.||.|||.|.||.||| |.|.|..|.|||
BL03015___aco 318 GGTTCTGCAAGGAAAAGCATCGTTTTTGTCCGAACACGACATACTTGTTG 367
BSNT_01349___ 364 ATCGAAGGA--GAAAA-AGGAAAAGAAATCAGAGAGGCGGACCAAGT-AT 409
| .||||| ||||| ||| |.|..|||| |.||.|..||.|| ||
BL03015___aco 368 A--AAAGGACGGAAAACAGG--AGGTCATCA---ATGCCGGGCATGTGAT 410
BSNT_01349___ 410 TGATTGCCTCCGGATCAGAGCCAATCGAGCTGCCTTTCGCCCCGTTTGAC 459
| ||.||..|.||..|||..||...||..||||||||.||..|.||||||
BL03015___aco 411 T-ATAGCGGCAGGGGCAGCACCTGCCGCACTGCCTTTTGCGTCTTTTGAC 459
BSNT_01349___ 460 GGCGA-ATGGATCCTCGACAGCAAAGACGCGCTTTCTCTTTCCGAGATTC 508
|| || .||||||.||.|||||..|||.||..|.|| .||.||| ||
BL03015___aco 460 GG-GAGCTGGATCATCCACAGCGGAGATGCCATGTC-ATTGCCG----TC 503
BSNT_01349___ 509 CGTC-----------TTCACTAGTCATTGTCGGCGGCGGTGTCATCGGGT 547
|.|| || |.|||.|||||||.||..|||||||.|
BL03015___aco 504 CATCCCTGAAACGATTT------TTATTATCGGCGGAGGAATCATCGGCT 547
BSNT_01349___ 548 GTGAGTATGCAGGGCTGTTCGCCAGATTGGGATCGAAGGTGACCATCATT 597
||||.|.|||..|..|.|.|..|||..|||||.||||.||||.|||
BL03015___aco 548 GTGAATTTGCCAGTATATACAGCAGGCTGGGAGCGAACGTGATCAT---- 593
BSNT_01349___ 598 GAAACAGCGGACCAG------CTGATCCCGGCTGAAGACGA---AGATAT 638
|||.||.||| |.|||.|.|.||||.||.|| .|||||
BL03015___aco 594 -----AGCCGAGCAGGCGGAACAGATTCTGCCTGAGGAAGATCCGGATAT 638
BSNT_01349___ 639 TGCCCGTCTTT-TTCAGGAGAA-ACTTGAGGAAGACGGTGTCGAAGTG-- 684
|| |||.|||| ||| |.|.|| .||.|||||...|||.||| .|||
BL03015___aco 639 TG-CCGCCTTTCTTC-GCACAAGTCTCGAGGAGTCCGGCGTC--CGTGTT 684
BSNT_01349___ 685 --CATACCTCATC----CAGATTAGAACGGGTGGATCAAACGGCCAAAAC 728
|| |||| || |.|.||.||..|.|||| |.||||
BL03015___aco 685 TTCA-----CATCTGTACA-AGTGGAGCGTCTTGATC---CTGCCA---- 721
BSNT_01349___ 729 GGCA--------ATATGGAAAA--GCG--GTCAGCGAGAGTTTAAAACGA 766
|||| .|.||.|||| ||| |.|||| |||||.|...
BL03015___aco 722 GGCAGCGCGTCTTTCTGAAAAATGGCGATGACAGC-----TTTAATATTC 766
BSNT_01349___ 767 AGGCCGAT-TATGTGCTGGTGGCGATCGGCAGAAAACCCCGTCTTGACGG 815
|.||.||| .|||| ||.||.||..|||||.||||.||..| |||.|
BL03015___aco 767 AAGCTGATCGATGT-CTCGTCGCCGTCGGCCGAAAGCCGAG----GACTG 811
BSNT_01349___ 816 AT----TACAGCTTGAACAGGCCGGAGT------TGATTTTTCTCCAAAG 855
|| |..|||||||.||...|||||| ||| |...||||
BL03015___aco 812 ATGATCTGAAGCTTGACCATATCGGAGTCCAATATGA-----CAGGAAAG 856
BSNT_01349___ 856 GGCATTCCGGTGAATGGGCACATGCAGACGAACGTGCCTCATATTTACGC 905
|| ||||..||.||...|||.||||||||.|||.|.||.||||||||.||
BL03015___aco 857 GG-ATTCATGTCAACCAGCATATGCAGACAAACATCCCGCATATTTATGC 905
BSNT_01349___ 906 GTGCGGAGATGCTATAGGGGGCATTCAGCTCGCGCATGCCGCTTTCCATG 955
||||||.|||...|.|||.||..|||||||.||||||||||||||.||.|
BL03015___aco 906 GTGCGGGGATATCACAGGCGGGGTTCAGCTGGCGCATGCCGCTTTTCACG 955
BSNT_01349___ 956 AGGGCATCATCGCTGCTTCTCATGCTTCCGGAAGGGATGTCAAAATCAAT 1005
|.||.|.|.||||.||.||.|||||.||.||.||.||..|.||..||||
BL03015___aco 956 AAGGAACCGTCGCCGCATCCCATGCCTCAGGCAGAGACATGAAGGTCAA- 1004
BSNT_01349___ 1006 GAGAAACA-TGTGCCGCGCTGCATCTATACGTCCCCAGAAATCGCGTGTA 1054
.||..||| |.|.|||||||||||||||||.||.||.||||||||..|..
BL03015___aco 1005 CAGTGACATTATTCCGCGCTGCATCTATACTTCGCCTGAAATCGCAAGCG 1054
BSNT_01349___ 1055 TCGG----AATGACAGAACGACAGGCAAGAAGAA--TATACGGCGATGTG 1098
|||| |||||.|.|| |||| ||.|.| ..|||.|.|||||.
BL03015___aco 1055 TCGGCTTAAATGAAAAAA----AGGC--GAGGGAGCGCTACAGGGATGTT 1098
BSNT_01349___ 1099 AAAATTGGCGAATTTCCTTTTTCCGCAAACGGCAAGGCGCTCATT----- 1143
...||.||.||.|||||.|||||..|||||||.||.|||||.|||
BL03015___aco 1099 CGTATCGGAGAGTTTCCGTTTTCTTCAAACGGAAAAGCGCTTATTTTGAA 1148
BSNT_01349___ 1144 --AAACAGCAAGCGGAAGGAAAGGTCAAAATCATGGCTGAACCGGAAT-T 1190
||||.|| .||.||||||||||||||....||.|||||.| |
BL03015___aco 1149 TGAAACTGC-------CGGCAAGGTCAAAATCATCATAGAGCCGGAGTAT 1191
BSNT_01349___ 1191 CGGCGAAATCGTGGGTGTCTCGATGATTGGCCCGGATGTAACCGAGCTCA 1240
|.| |||||.||.||.||.|||||..|.||.||||..|.||||||.||.|
BL03015___aco 1192 CAG-GAAATTGTCGGGGTTTCGATCGTGGGTCCGGGAGCAACCGAACTGA 1240
BSNT_01349___ 1241 TCGGCCAAGCGGCAGCGATCATGAATGGTGAGATGACGGCAGATATGGC- 1289
|||||||.||.||.|..||..||.|||..|||.|||||||||| .||
BL03015___aco 1241 TCGGCCAGGCAGCCGTAATGTTGCATGCAGAGCTGACGGCAGA---CGCA 1287
BSNT_01349___ 1290 --GGAGCATTTTATCGCCGCCCATCCGACTTTATCGGAAAC-ATTGCATG 1336
||||||.||.|||||.||||||||||||.|.|||||||| ||| ||.|
BL03015___aco 1288 ATGGAGCACTTCATCGCGGCCCATCCGACTCTTTCGGAAACGATT-CACG 1336
BSNT_01349___ 1337 AGGC---GCTGTTAAGCAC---GATCGGCCTTGCGGTACA-TGCATAA 1377
|.|| |||| .|||| | |.|||| ||..|.|| |||..|
BL03015___aco 1337 AAGCTTTGCTG-CAAGC-CGCAGGTCGG----GCCATTCACTGCTGA- 1377
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.