Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01347 and BL03014
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_01347___acoC.1.5803.seq
# -bsequence dna-align/BL03014___acoC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01347___acoC-BL03014___acoC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01347___acoC-BL03014___acoC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01347___acoC
# 2: BL03014___acoC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1286
# Identity: 809/1286 (62.9%)
# Similarity: 809/1286 (62.9%)
# Gaps: 241/1286 (18.7%)
# Score: 2477.0
#
#
#=======================================
BSNT_01347___ 1 ATGGCGGTAAAAGTAGTGATGCCAAAATTGGGAATGGCCATGAAACAAGG 50
|||||.||..||||.||.|||||.||||||||.|||.|.||||||.||||
BL03014___aco 1 ATGGCTGTCGAAGTGGTCATGCCGAAATTGGGGATGTCGATGAAAGAAGG 50
BSNT_01347___ 51 GGAAGTATCGATATGGAATAAAAAAGTAGGCGACCCGGTTGAAAAGGGAG 100
....||.||..|.||||||||||||||.||.||..|.||||||||.||||
BL03014___aco 51 TACGGTTTCCGTCTGGAATAAAAAAGTCGGGGAAGCCGTTGAAAAAGGAG 100
BSNT_01347___ 101 AAAGCATTGCCAGCATTCAA-TCGGAGAAAATTGAAATGGAGATCGAAGC 149
||||||||||||||| |||| ||.||.|||||.||||||||.||||||.|
BL03014___aco 101 AAAGCATTGCCAGCA-TCAATTCCGAAAAAATCGAAATGGAAATCGAATC 149
BSNT_01347___ 150 GCCTGAAAAAGGAACGCTGATCGATATCAAAG----TGAA--AGAGGGAG 193
.||.|.|||.|||||..||.|.||.|||.||| |||| |||||||
BL03014___aco 150 TCCGGCAAACGGAACCGTGTTGGACATCCAAGTATCTGAAGGAGAGGGA- 198
BSNT_01347___ 194 AAGAGGTTCCGCCCGGCACAGCGATCTGCTATATCGGGGACGCCAATGAG 243
||.|||||.||.||.|..||||||...||||| .|||||
BL03014___aco 199 -----GTGCCGCCGGGAACCGTCATCTGCCGCATCGG------AAATGA- 236
BSNT_01347___ 244 TCGGTGCAGGAAGAGGCGAGCGCGCCTGTTGCTGAAGACAATATGCCGCA 293
|..||| |||| .||||
BL03014___aco 237 -------------AAACGA------------------ACAA----ACGCA 251
BSNT_01347___ 294 --AGCCGTTCAGCCCGTCAAACAAGAAAACAAACCCGCAGCCTCCAAAAA 341
|| ||| ||||| ||||| |.|||.|.| |||..||
BL03014___aco 252 GGAG------AGC----CAAAC---AAAAC--AGCCGGATC--CCACGAA 284
BSNT_01347___ 342 AGATCGAATGAAAATATCTCCAGTCGCCAGGAAAATAGCAGAAAAAGCAG 391
|||.||.||.|||||.|||||.|..||..|.|||||.||..|||..|||
BL03014___aco 285 AGAACGGATTAAAATTTCTCCGGCTGCGCGCAAAATTGCGCAAAGCGCA- 333
BSNT_01347___ 392 GAT-TAGACCT-AAAACAACTGAAAGGAACTGGACCAGGCGGACGAATCG 439
.|| |||||.| ||||| .|||||.||.||.||.||.||.||..||||..
BL03014___aco 334 AATATAGACATCAAAAC-GCTGAAGGGCACAGGCCCCGGGGGGAGAATTA 382
BSNT_01347___ 440 TGAA---GGATGACGTAACAAAGGCTCTT--------GCTGAACAGAAAA 478
.||| ||||| .||..| ||||.||| ||.|||||
BL03014___aco 383 CGAAAGCGGATG-TGTTGC--AGGCGCTTCCCGGCCGGCCGAACA----- 424
BSNT_01347___ 479 AAGATCA---GGCAAAGCCTGTGTCGGAGCAGAA-AG----CGCAGGAAA 520
|.|| |||.|||.|| |.|||.||| || |||.||.||
BL03014___aco 425 ---AGCAGGCGGCTAAGGCT-----GAAGCTGAAGAGCGGCCGCCGGCAA 466
BSNT_01347___ 521 TCCCGGTGACAGGCATGAG--AAAGGTCATCGCTGCCCGAATGCAGGAAA 568
.|||| ||||| |||.| ||.||.||..|||||..|||||
BL03014___aco 467 GCCCG---------ATGAGGAAAACG--ATAGCCGCAAGAATGACGGAAA 505
BSNT_01347___ 569 GCTTGGCAAACAGCGCGCAGCTGACGATCACGATGAAAGCTGATATCACC 618
||.||..|||||||||.|||||||||||.||||||||.||.||.|||||.
BL03014___aco 506 GCCTGCAAAACAGCGCCCAGCTGACGATTACGATGAAGGCGGACATCACG 555
BSNT_01347___ 619 AAGCTTGCCACT-CTTCAAAAACAGCTT--TCACCAACTGCGGAAGAGAG 665
|| .||..||.| ||.|||||||||||| |.| |||.||..||...||
BL03014___aco 556 AA-ATTAACAGTCCTGCAAAAACAGCTTAATGA--AACCGCTCAATCAAG 602
BSNT_01347___ 666 ATACGGCACAAAACTGACGATCACTCATTTTGTCTCAAGAGCCGCCG--T 713
|||||..||.||.||||||||||||.||||||.|.|.||.||.||.| |
BL03014___aco 603 ATACGATACGAAGCTGACGATCACTGATTTTGCCGCCAGGGCAGCTGTTT 652
BSNT_01347___ 714 TCTCGC-TCTGCAAGCTCACCCTGTGCTGAACAGCTTTTATCAAAA---- 758
|.|||| |.|| |.|||.||.|...|||||||..||||||||.|
BL03014___aco 653 TTTCGCTTTTG---GATCATCCGGCCATGAACAGTGTTTATCAAGACGGA 699
BSNT_01347___ 759 --------------TGAGCGCATCATCACACATCCCCATGTGCACCTTGG 794
|||| |||||.||..|.||
BL03014___aco 700 AGGCTTGCGACCTTTGAG------------------CATGTTCATTTAGG 731
BSNT_01347___ 795 TATGGCTGTAGCCTTGGAAAATGGCTTAGTGGTGCCTGTCATCCGCCATG 844
..||||.|..||.|||||..|.|||.|.|..||.||.|||||||||||||
BL03014___aco 732 AGTGGCGGCCGCTTTGGACGAAGGCCTGGCCGTTCCCGTCATCCGCCATG 781
BSNT_01347___ 845 CTGAAAAGCTATCGCTGATAGAACTGGCTCAATCTATCTCAGAAAAT--- 891
|.||...|||..|||||||.|||.|||| || |||||||
BL03014___aco 782 CCGAGCGGCTCCCGCTGATCGAATTGGC-CA---------AGAAAATCAA 821
BSNT_01347___ 892 -------GCCAAAAAAGCACGCGAGGGACGTGCGGGAAG----------- 923
||||||||||| ||||||||
BL03014___aco 822 ATGGTACGCCAAAAAAGC-------------GCGGGAAGGCCGGCTTCTA 858
BSNT_01347___ 924 --CGAAGAACTGCAAGGATCTACTTTCTCCATTACAAACCTTGGCGCGTT 971
|||.|||.|..|||||||.||.||..|.|||||||||||.|||||.|.
BL03014___aco 859 CACGATGAAATAGAAGGATCGACATTTACGATTACAAACCTCGGCGCATA 908
BSNT_01347___ 972 TGGAGTTGAGCATTTCACACCGATACTAAATCCGCCGGAAACAGGCATTC 1021
|||.||.|||||.||.||.|||||..|.||||||||||||||.||.||.|
BL03014___aco 909 TGGTGTCGAGCACTTTACCCCGATCTTGAATCCGCCGGAAACCGGGATAC 958
BSNT_01347___ 1022 TCGGCATCGGAGCAAGCTAT--GACACGCCGGTGTATCAAGGGGA-GGAG 1068
||||..||||...||..||| |.|| ||.||.|||||| || ||||
BL03014___aco 959 TCGGAGTCGGCCAAATGTATTCGGCA--CCCGTTTATCAA---GACGGAG 1003
BSNT_01347___ 1069 ATCGTCAGAA---GCACGATCCTGCCACTCAGCCTGACATTTGATCACAG 1115
|.| |.|.|| ||.|.||.|||||.|||||.|||||.|||||||||.|
BL03014___aco 1004 AAC-TGACAAAGGGCGCCATTCTGCCGCTCAGTCTGACTTTTGATCACCG 1052
BSNT_01347___ 1116 AGCGTGTGACGGCGCCCCTGCCGCTGCATTCCT----GAAGGCGATGAAA 1161
.|||..|||.||.||.|||||.||.|||||||| ||.| |||||
BL03014___aco 1053 CGCGCTTGATGGTGCGCCTGCTGCAGCATTCCTTTCAGATG----TGAAA 1098
BSNT_01347___ 1162 ACATATTTGGAAGAACCCGCAGCATTAATTTTATAG 1197
|..|||||||||||.||.|||.||.|..||||||||
BL03014___aco 1099 AACTATTTGGAAGATCCGGCATCAATTCTTTTATAG 1134
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