Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01346 and BL03013
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:52
# Commandline: needle
# -asequence dna-align/BSNT_01346___acoB.1.5803.seq
# -bsequence dna-align/BL03013___acoB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01346___acoB-BL03013___acoB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01346___acoB-BL03013___acoB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01346___acoB
# 2: BL03013___acoB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1051
# Identity: 787/1051 (74.9%)
# Similarity: 787/1051 (74.9%)
# Gaps: 38/1051 ( 3.6%)
# Score: 2898.0
#
#
#=======================================
BSNT_01346___ 1 ATGGCGAGAGTCATAAGCATGTCAGACGCGATCAATGAAGCAATGAAGCT 50
|||.||||.|..||.||||||||||.|||..|.||||||||.||.||.||
BL03013___aco 1 ATGACGAGGGAAATCAGCATGTCAGCCGCATTGAATGAAGCGATCAAACT 50
BSNT_01346___ 51 TGCGATGAGAAGAGATGAAAATGTGCTTTTGATCGGTGAGGATGTCGCCG 100
||||||||||||.||.||..|.||..||||.||.||.||.||||||||.|
BL03013___aco 51 TGCGATGAGAAGGGACGATCACGTCATTTTAATGGGGGAAGATGTCGCAG 100
BSNT_01346___ 101 GGGGAGCGGCTGTCGATCATTTGCAGGATGATGAAGCATGGGGCGGTGTA 150
|.||||||..||||||||||.||||||||||||||||||||||||||||.
BL03013___aco 101 GAGGAGCGAATGTCGATCATCTGCAGGATGATGAAGCATGGGGCGGTGTG 150
BSNT_01346___ 151 TTAGGGGTCACAAAGGGGCTCGTACAGGAATT----CGGGCGTACAAGAG 196
.|.||.|||||.||.|||.|.||.|||||||| ||||.| .|.|
BL03013___aco 151 CTCGGCGTCACGAAAGGGATTGTTCAGGAATTTGGACGGGAG----CGCG 196
BSNT_01346___ 197 TGCTGGACACACCGATTTCTGAGGCGGGCTATATGGGTGCGGCTATGGCT 246
|.||.||.||.|||||...|||.|||||.||.||.||.||.||.||||||
BL03013___aco 197 TCCTTGATACGCCGATCAGTGAAGCGGGGTACATCGGCGCAGCCATGGCT 246
BSNT_01346___ 247 GCGGCATCAACCGGTTTGAGACCGATTGCCGAGCTGATGTTTAACGATTT 296
||.||.|||||||||||.||.|||||.||.||..||||||||||||||||
BL03013___aco 247 GCTGCTTCAACCGGTTTAAGGCCGATCGCGGAATTGATGTTTAACGATTT 296
BSNT_01346___ 297 TATCGGCACGTGCTTTGACCAGGTGATCAACCAAGGGGCGAAATTCCGTT 346
||||||.||.||.||.|||||||||.|.|||||.||.|||||||||||.|
BL03013___aco 297 TATCGGAACATGTTTGGACCAGGTGCTGAACCAGGGAGCGAAATTCCGCT 346
BSNT_01346___ 347 ACATGTTTGGCGGAAAAGCGCAAGTGCCGATTACCGTCCGCACCACATAC 396
|||||||||||||.||||||.||||.||||||||..||||.||.||..||
BL03013___aco 347 ACATGTTTGGCGGCAAAGCGGAAGTTCCGATTACGATCCGGACGACCCAC 396
BSNT_01346___ 397 GGAGCAGGGTTCCGGGCCGCTGCCCAGCATTCAC-AAGCGCTGTATGGCC 445
||.||.||.||..||||.||.|||||||||||.| |||| .||||||.||
BL03013___aco 397 GGCGCCGGCTTTAGGGCGGCCGCCCAGCATTCGCAAAGC-TTGTATGCCC 445
BSNT_01346___ 446 TTTTCACGAGCATCCCTGGACTGAAGACAG---TTGTTCCATCCAATCCG 492
|.||.||.|||||.||.|||||||| || ||||.||.||.|..|||
BL03013___aco 446 TATTTACAAGCATTCCCGGACTGAA---AGTGATTGTGCCGTCGACCCCG 492
BSNT_01346___ 493 TATGATGCCAAAGGTCTTCTGCTTGCAGCAATAGAAGATAATGATCCGGT 542
||.||.||.|||||..|..||||.||.||.||.||||||.|.||.|||||
BL03013___aco 493 TACGACGCAAAAGGATTATTGCTCGCTGCGATTGAAGATCAGGACCCGGT 542
BSNT_01346___ 543 GTTCTTCTTTGAAGACAAAACGTCCTACAACATGAAGGGCGAGGTGCCGG 592
..||||.|||||||||||||||...||||||||||..|||||.|||||||
BL03013___aco 543 TATCTTTTTTGAAGACAAAACGCTGTACAACATGACAGGCGATGTGCCGG 592
BSNT_01346___ 593 AAGATTATTATACAATTCCCCTTGGAAAAGCGGATATCAAACGCGAGGGC 642
||||.|||||.||..||||..|.||||||||.||||||||.||..|.|||
BL03013___aco 593 AAGAATATTACACGCTTCCAATCGGAAAAGCAGATATCAAGCGGAAAGGC 642
BSNT_01346___ 643 AATGATGTTACGCTCTTTGCAGTCGGCAAGCAGGTCAATACTGCGCTTGA 692
...|||||.|||.|..|||||.|||||||.|||||..||||.||||||.|
BL03013___aco 643 GCCGATGTAACGATTGTTGCAATCGGCAAACAGGTTCATACGGCGCTTCA 692
BSNT_01346___ 693 AGCGGCTGCACAGCTTTCAGAGAGGGGCATCGAAGCCGAGGTCCTTGATC 742
||||||.|.||||||.||||.|.||||.|||||||||||..|||||||||
BL03013___aco 693 AGCGGCGGAACAGCTCTCAGCGCGGGGAATCGAAGCCGAAATCCTTGATC 742
BSNT_01346___ 743 CGCGCAGTCTGTCCCCTCTGGATGAGGATGCGATTTTCACATCGTTAGAA 792
||||.||.||.||.||.||.|||||.||.||..|..|..||||..|||||
BL03013___aco 743 CGCGAAGCCTTTCGCCGCTTGATGAAGAGGCCGTCCTTGCATCCGTAGAA 792
BSNT_01346___ 793 AAAACAAATCGTCTGATCATCATTGATGAAGCCAATCCGCGATGCAGCAT 842
||||||||..|.||..|.|||.|.|||||.|||||||||.||||||||||
BL03013___aco 793 AAAACAAACAGGCTTGTGATCGTCGATGAGGCCAATCCGAGATGCAGCAT 842
BSNT_01346___ 843 TGCCACGGATATTGCTGCGC----TTGTC-GCTGACAAGGGCTTTGATTT 887
.|||.||||||| ||| |||.| ||.||.||.||.|||||||.
BL03013___aco 843 CGCCGCGGATAT-----CGCATCATTGGCGGCAGATAAAGGATTTGATTC 887
BSNT_01346___ 888 GCTTGATGCGCCGATTAAACGGATTACAGCGCCGCATACACCGGTTCCGT 937
||||||.||.|||.|||||..|.|.||.||.||||||||.|||||.||.|
BL03013___aco 888 GCTTGACGCACCGGTTAAAAAGGTGACGGCTCCGCATACGCCGGTGCCAT 937
BSNT_01346___ 938 TTTCACCAGTGCTTGAAGATCAATATTTGCCGACACCAGATAAAATTGT- 986
|||||||....||||||||.|..|||||||||||.||.||.|||.|.||
BL03013___aco 938 TTTCACCGCCTCTTGAAGACCTGTATTTGCCGACGCCGGAAAAAGTCGTG 987
BSNT_01346___ 987 --CAGCGTCACGCTTGAATTGCTTGGCGAGCCGGCAATGAAT------TA 1028
||.||| ||||||..||||.||.||..|..|||...|| ||
BL03013___aco 988 AACACCGT---GCTTGAGATGCTCGGAGAAACATCAACACATACGGTGTA 1034
BSNT_01346___ 1029 A 1029
|
BL03013___aco 1035 A 1035
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