Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04697 and BL03009
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:52
# Commandline: needle
# -asequence dna-align/BSNT_04697___ald.1.5803.seq
# -bsequence dna-align/BL03009___ald.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04697___ald-BL03009___ald.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04697___ald-BL03009___ald.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04697___ald
# 2: BL03009___ald
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1173
# Identity: 861/1173 (73.4%)
# Similarity: 861/1173 (73.4%)
# Gaps: 69/1173 ( 5.9%)
# Score: 3080.0
#
#
#=======================================
BSNT_04697___ 1 ATGATCATAGGGGTTCCTAAAGAGATAAAAAACAATGAAAACCGTGTCGC 50
|||||.||.||.||.||.|||||.||.||||||||||||||||||||.||
BL03009___ald 1 ATGATTATCGGCGTACCGAAAGAAATCAAAAACAATGAAAACCGTGTTGC 50
BSNT_04697___ 51 ATTAACACCCGGGGGCGTTTCTCAGCTCATT--TCAAACGGC----CACC 94
.||.||.|||||.|..|.|||||| ||| || .|||| ||||
BL03009___ald 51 TTTGACTCCCGGTGCGGCTTCTCA----ATTGATC--GCGGCAGGACACC 94
BSNT_04697___ 95 GGGTGCTGGTTGAAACAGGCGCGGGCCTTGGAAGCGGATTTGAAAATGAA 144
|.||..|.||.||||.||.||||||...|||||||||.|||||||||||.
BL03009___ald 95 GCGTCATCGTGGAAAAAGACGCGGGGACTGGAAGCGGGTTTGAAAATGAG 144
BSNT_04697___ 145 GCCTATGAGTCAGCAGGAGCGGAAATCATTGCTGATCCGAAACAG----- 189
|..||.|..||||..|||||.||.||| ||.|||..||
BL03009___ald 145 GATTACGTCTCAGTGGGAGCCGAGATC--------TCAGAACAAGCGGAA 186
BSNT_04697___ 190 ---GTCTGGGA---CGCCGAAATGGTCATGAAGGTAAAAGAACCGCTGCC 233
|||||||| .||.||||||||.|||||.||.|||||.|||||.||
BL03009___ald 187 GCCGTCTGGGAAGCGGCTGAAATGGTGATGAAAGTCAAAGAGCCGCTCCC 236
BSNT_04697___ 234 GGAAGAATATGTTTATTTCCGCAAAGGACTTGTGCTGTTTACGTACCTTC 283
.|||||||||...|||||..|..||||.||..|..||||.||.|||||.|
BL03009___ald 237 TGAAGAATATCCGTATTTTAGAGAAGGTCTCATCTTGTTCACCTACCTGC 286
BSNT_04697___ 284 ATTTAGCAGCTGAGCCTGAGCTT-GCACAGGCCTTGAAGGATAAAGGAGT 332
||.||||.||.|||||| ..||| ||..|.||.||.|||.|.|||||.||
BL03009___ald 287 ATCTAGCCGCAGAGCCT-TCCTTGGCTGAAGCATTAAAGCAGAAAGGCGT 335
BSNT_04697___ 333 AACTGCTATCGCATATGAAACGGTCAGTGAAGGCCGGACATTGCCT--CT 380
.||.||.|||||.||||||||.|||||..|.||||| ||.||| ||
BL03009___ald 336 GACAGCCATCGCCTATGAAACCGTCAGCAATGGCCG----TTCCCTTCCT 381
BSNT_04697___ 381 T--CTGACGCCAATGTCAGAGGTTG-CGGGCAGAATGGCGGCGCAAATCG 427
| ||||||||.|||||.|||||.| ||||| |.|||||.||.|||||||
BL03009___ald 382 TTGCTGACGCCGATGTCTGAGGTAGCCGGGC-GGATGGCCGCCCAAATCG 430
BSNT_04697___ 428 GCGCTCAATTCTTAGAAAAGCCTAAAGGCGGAAAAGGCATTCTGCTTGCC 477
||||.||.|||.|.||||||||.|||||||||||||||||..|..|.|||
BL03009___ald 431 GCGCGCAGTTCCTCGAAAAGCCGAAAGGCGGAAAAGGCATATTATTGGCC 480
BSNT_04697___ 478 GGGGTGCCGGGCGTTTCTCGCGGAAAAGTAACGATTATCGGAGGAGGCGT 527
||.||.||.||.||..|.|||||.|||||.|||||.|||||.||||||||
BL03009___ald 481 GGTGTACCCGGAGTCGCGCGCGGGAAAGTGACGATCATCGGCGGAGGCGT 530
BSNT_04697___ 528 TGTCGGGACAAACGCGGCGAAAATGGCTGTCGGACTCGGTGCAGATGTGA 577
||||||.|||||.|||||.|||||.||.|..||.|||||.||.||.||||
BL03009___ald 531 TGTCGGCACAAATGCGGCAAAAATCGCGGCGGGCCTCGGAGCCGACGTGA 580
BSNT_04697___ 578 CGATCATTGACTTAAACGCAGACCGCTTGCGCCAGCTTGATGACATC--T 625
||||.||.||.||||.|||.||.|||.||||||||||||||| ||| |
BL03009___ald 581 CGATGATCGATTTAAGCGCGGATCGCCTGCGCCAGCTTGATG--ATCAAT 628
BSNT_04697___ 626 TCGGCCATCAGATTAAAACGTTAATTTCTAATCCGGTCAATATTGCTGAT 675
|||||.||||.||||||||.||.||.||.|||||||||||.||.||.|||
BL03009___ald 629 TCGGCAATCAAATTAAAACATTGATGTCCAATCCGGTCAACATCGCCGAT 678
BSNT_04697___ 676 GCTGTAGCGGAAGCGGATCTCCTCATTTGCGCGGTATTAATTCCGGGTGC 725
||.|||||||||||.||.||||||||.||||||||..|.||.||||||||
BL03009___ald 679 GCCGTAGCGGAAGCCGACCTCCTCATCTGCGCGGTTCTGATCCCGGGTGC 728
BSNT_04697___ 726 TAAAGCTCCGACTCTTGTCACTGAGGAAATGGTAAAACAAATGAAACCTG 775
.|||||.||||||.|.||.||.||.||.|||||.|||||.||||||||.|
BL03009___ald 729 CAAAGCGCCGACTTTAGTGACGGAAGAGATGGTCAAACAGATGAAACCGG 778
BSNT_04697___ 776 GTTCAGTCATTGTTGATGTAGCGATCGACCAAGGCGGCATCGTCGAAACT 825
|.||.||.||||||||.||.||.|||||.|||||||||||||||||.||.
BL03009___ald 779 GCTCTGTGATTGTTGACGTCGCAATCGATCAAGGCGGCATCGTCGAGACG 828
BSNT_04697___ 826 GTCGACCATATCACAACACATGATCAGCCAACATATGAAAAACACGGGGT 875
||.||.||.||||||||.||.||..|.||.||.||||..||||||||.||
BL03009___ald 829 GTGGATCACATCACAACCCACGACAATCCGACCTATGTCAAACACGGAGT 878
BSNT_04697___ 876 TGTGCATTATGCTGTAGCGAACATGCCGGGCGCAGTCCCTCGTACGTCAA 925
.||.|||||.|||||.||.||||||||.|||||.||.||.||.||.||.|
BL03009___ald 879 CGTCCATTACGCTGTTGCCAACATGCCTGGCGCCGTTCCGCGGACATCTA 928
BSNT_04697___ 926 CAATCGCCCTGACTAACGTTACTGTTCCATACGCGCTGCAAATCGCGAAC 975
||.|.||.|||||.||.||.||.|||||.||.|||||..|||||||||||
BL03009___ald 929 CAGTTGCGCTGACGAATGTAACAGTTCCGTATGCGCTTGAAATCGCGAAC 978
BSNT_04697___ 976 AAAGGGGCAGTAAAAGCG---CTCGCAGACAATGCGGCACTGAGAGCGGG 1022
|||||.||.|.||||||| ||.|.|.||..|||| ||.|.|||.||
BL03009___ald 979 AAAGGCGCGGAAAAAGCGATTCTTGAAAACCCTGCG---CTAAAAGCCGG 1025
BSNT_04697___ 1023 TTTAAACACCGCAAACGGACACGTGACCTATGAAGCTGTAGCAAGAGATC 1072
..|.|||||.||||||||.||..|.||.||||||||.|||||.||.||..
BL03009___ald 1026 CGTCAACACAGCAAACGGCCATATTACTTATGAAGCCGTAGCCAGGGACT 1075
BSNT_04697___ 1073 TAGGCTATGAGTATGTTCCTGCCGAGAAAGCTTTACAG-GAT-GAA---- 1116
||..|||||..||.|||||.|| |.||||| | ||| |||
BL03009___ald 1076 TAAACTATGGCTACGTTCCCGC----AGAGCTT----GCGATCGAAAATT 1117
BSNT_04697___ 1117 --TCATCTGTAGCGGGTGCTTAA 1137
||.||.|..||.||.||.||.
BL03009___ald 1118 CGTCGTCAGCCGCCGGCGCATAG 1140
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