Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02464 and BL02998

See Amino acid alignment / Visit BSNT_02464 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence dna-align/BSNT_02464___ylaL.1.5803.seq
#    -bsequence dna-align/BL02998___ylaL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02464___ylaL-BL02998___ylaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02464___ylaL-BL02998___ylaL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02464___ylaL
# 2: BL02998___ylaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 549
# Identity:     317/549 (57.7%)
# Similarity:   317/549 (57.7%)
# Gaps:         129/549 (23.5%)
# Score: 852.0
# 
#
#=======================================

BSNT_02464___      1 ATGAGCGTTATCCAAGTA------AAAGGCAATGTTACATATCCAATTAC     44
                     ||||||.||      |||      |.|||.|||||.|..|||||.|||||
BL02998___yla      1 ATGAGCATT------GTAACGATCACAGGAAATGTAAAGTATCCGATTAC     44

BSNT_02464___     45 CATTGATCCAAGCGTATGGATTTTTGATGATCGCAAATT-----------     83
                     ..|.|||||.|||||.||||||||||||||.||.|||||           
BL02998___yla     45 GCTCGATCCGAGCGTCTGGATTTTTGATGACCGAAAATTCGATCTCGAGC     94

BSNT_02464___     84 --TTCGTTTGAC----CGCAAAGGGGACAGTCAAGACACATATTTACAAT    127
                       |||.|||.||    ||.|.|||                    ||||  
BL02998___yla     95 AGTTCTTTTCACATTTCGGAGAGG--------------------TACA--    122

BSNT_02464___    128 CAGCCGGGGATGAA---TCCGACC------TTGATCCGGAACGCGTCATC    168
                            |||||||   ..|||||      ||||.|.||||||....|||
BL02998___yla    123 -------GGATGAAGATGACGACCTTGTGATTGACCGGGAACGGCAAATC    165

BSNT_02464___    169 AGAG-AGGGGC-GAATTGCCCCGCCTACATTAAAGACGGAAAAACAATAT    216
                     |||| |||.|| |.||  |.|||||.||..|.||..|.||.|||.|.|||
BL02998___yla    166 AGAGAAGGTGCTGTAT--CGCCGCCGACGCTGAAATCAGAGAAAAAGTAT    213

BSNT_02464___    217 GAGAAGCAAAAACTGATGAACGGCAGTTTCGCAATGAGACTTGGGACTGT    266
                     ||.|||.|||||.||.|..||||||.|||||.|||.|..||||.|.||.|
BL02998___yla    214 GAAAAGGAAAAATTGCTTGACGGCACTTTCGGAATCAAGCTTGAGCCTTT    263

BSNT_02464___    267 CCTGAAAAATGCTGAGCCGAACA-GCTCTG-CGACACAATGTGTATTTGT    314
                     ..|||||||.||.|||..| .|| ||||.| ||.|| ||||..|.|   |
BL02998___yla    264 TTTGAAAAACGCGGAGGTG-TCAGGCTCCGCCGTCA-AATGCCTCT---T    308

BSNT_02464___    315 CACAAGTTCGGGAAAG--GCCGCCGTTTCTCTGGAAACCGCTC----TGA    358
                     ||.||   |||  |||  |..|.|||||         |||.||    |||
BL02998___yla    309 CAAAA---CGG--AAGGTGAAGACGTTT---------CCGTTCCAATTGA    344

BSNT_02464___    359 A-----------CAGTATTGTCCATTTCAGTGAGGCAGGCAAGCCGATTC    397
                     |           ||..|||.||...|||||..|...||||||||||.||.
BL02998___yla    345 AGAAGCGGGCGGCATGATTCTCTGCTTCAGCAACAAAGGCAAGCCGCTTG    394

BSNT_02464___    398 AAGAAGGCGGCCCCGTGCATATTTACTTTGAAGACCCGGTTCATCACAAA    447
                     ..||||.|||.||.||.||..||||.|||...||  |||||| |.|||| 
BL02998___yla    395 GCGAAGACGGGCCTGTACACGTTTATTTTCCCGA--CGGTTC-TAACAA-    440

BSNT_02464___    448 CAGCCGAT----------TACCGATGTAAAAGAGATCGAAATCATTTAA    486
                          |||          .|.||| ||||||||.||..|.||.||||||
BL02998___yla    441 -----GATGAATCCTGTGAAACGA-GTAAAAGAAATTCACATTATTTAA    483


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