Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02456 and BL02994
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02456___ylaF.1.5803.seq
# -bsequence dna-align/BL02994___ylaF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02456___ylaF-BL02994___ylaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02456___ylaF-BL02994___ylaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02456___ylaF
# 2: BL02994___ylaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 198
# Identity: 139/198 (70.2%)
# Similarity: 139/198 (70.2%)
# Gaps: 18/198 ( 9.1%)
# Score: 465.0
#
#
#=======================================
BSNT_02456___ 1 ATGAAAAAAATGAATTGGCTTTTACTATTATTTGCATTTGCAGCGGTTTT 50
.|||||.||||.||.|||.||||..|||||||.|||.||||.||.||..|
BL02994___yla 1 GTGAAACAAATCAAATGGATTTTCTTATTATTCGCACTTGCTGCAGTGAT 50
BSNT_02456___ 51 CAGCATTATGCTGATCGGCGTCTTTA-TCGCTGAAAAAAGCCCTGCAGGC 99
||||||.|||.|||||||.|| |..| ||||.|||||||||.|.||.|||
BL02994___yla 51 CAGCATCATGATGATCGGAGT-TGCAGTCGCCGAAAAAAGCGCAGCCGGC 99
BSNT_02456___ 100 AT---TATCGCCAGC---ATTGTACTTGT--TTGCGCTGTCATGGGCGGC 141
.| .|||||||.| |||.|..|.|| || |||||..||
BL02994___yla 100 GTCGCAATCGCCATCGCGATTCTGATCGTCATT--------ATGGGAAGC 141
BSNT_02456___ 142 GGATTTACATTAAAAAAGAAAATGCGCGAACAAGGCTTGCTTGATTAA 189
||.||.|||.|.|||||.|.||||||||||.|||||.|||||||.||.
BL02994___yla 142 GGTTTCACACTGAAAAAAAGAATGCGCGAAAAAGGCCTGCTTGAATAG 189
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