Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02498 and BL02993
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence dna-align/BSNT_02498___ylbN.1.5803.seq
# -bsequence dna-align/BL02993___ylbN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02498___ylbN-BL02993___ylbN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02498___ylbN-BL02993___ylbN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02498___ylbN
# 2: BL02993___ylbN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 530
# Identity: 418/530 (78.9%)
# Similarity: 418/530 (78.9%)
# Gaps: 25/530 ( 4.7%)
# Score: 1634.5
#
#
#=======================================
BSNT_02498___ 1 ATGAAATGGACGATTTATCAGCTGCATCAAATGCCAAAACAAAG--TTTT 48
||||||||||||||..||||||||.||||||||||.|| .||| .|||
BL02993___ylb 1 ATGAAATGGACGATACATCAGCTGAATCAAATGCCGAA--GAAGGACTTT 48
BSNT_02498___ 49 GAGTTTGATGAAACAGTTGAGTTAAATGA--GCTGACAAAGCTGAATTCT 96
||.|||||||||||||||||.||||..|| .||..|||||| ||.
BL02993___ylb 49 GAATTTGATGAAACAGTTGATTTAAGCGAACTCTCTCAAAGC-----TCG 93
BSNT_02498___ 97 GACATTCGCCGCATTTCTCCCGTCCGGGTG-AAGGGCAGAGCGGATATCA 145
||.||.|||.|||||||.||.||.|||||| |||||| |.|||||.|||.
BL02993___ylb 94 GAAATCCGCAGCATTTCACCGGTGCGGGTGAAAGGGC-GCGCGGAAATCC 142
BSNT_02498___ 146 AATCCAAACAGGTTTCGTTTGATTTTACAATTTCAGGCGAAATGATTTTG 195
..||.||.||||.|.|.|||||||||||.|||||||||||.|||||.|||
BL02993___ylb 143 GCTCAAAGCAGGCTGCATTTGATTTTACCATTTCAGGCGAGATGATCTTG 192
BSNT_02498___ 196 CCATGCTCAAGAACACTCGTTGATGTCCCGTATCCATTTGAAATTTCAAC 245
||.|||||||||||.||.||||||||.|..||||||||....|||||.||
BL02993___ylb 193 CCTTGCTCAAGAACGCTTGTTGATGTTCGTTATCCATTCAGCATTTCTAC 242
BSNT_02498___ 246 AAAAGAACTGTTTATATTTCATCACACGGATGATATAGAAGATGATGACG 295
||||||||||||||||||||||.|.||.||.||.||.||||||||.|||.
BL02993___ylb 243 AAAAGAACTGTTTATATTTCATAAGACCGAGGAAATGGAAGATGAAGACA 292
BSNT_02498___ 296 TTCATATTGTTGAGGACGATACT-ATCGACTTAACTCCGATCGTGAAAGA 344
|.|||||||||||.||.|| .|| ||||||||.||||||.||||||||||
BL02993___ylb 293 TCCATATTGTTGAAGATGA-CCTCATCGACTTGACTCCGGTCGTGAAAGA 341
BSNT_02498___ 345 AGAAATTCTTTTAGAAATCCCTATGCAAATCTTTTGTGAATCTGAACAAG 394
||||||.|||.|.||.|||||||||||||||||||||||.||||..|||.
BL02993___ylb 342 AGAAATCCTTCTTGAGATCCCTATGCAAATCTTTTGTGAGTCTGTTCAAA 391
BSNT_02498___ 395 AAAAAGGAGCTGCTCCTCAAGAAGGAAAGGATTGGCAAGTCATTTCGGAA 444
||.|||.||.||||||.||.||.||.|||||||||||.||||||.|.|||
BL02993___ylb 392 AAGAAGAAGGTGCTCCGCAGGAGGGCAAGGATTGGCAGGTCATTACAGAA 441
BSNT_02498___ 445 GAAGACAAGAA-----GAATCAAGTTGATCCGAGACTTGCAGCCCTTGAA 489
||.|||..||| |.||| ||||||||||||||.|..||.|..
BL02993___ylb 442 GATGACCGGAAAGACCGGATC-----GATCCGAGACTTGCCGGACTCGGG 486
BSNT_02498___ 490 AAGCTCTTAAAACAAGATGATGAATCTTAA 519
|||||||||||||||||.||||||||||||
BL02993___ylb 487 AAGCTCTTAAAACAAGAAGATGAATCTTAA 516
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