Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02495 and BL02992
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence dna-align/BSNT_02495___ylbL.1.5803.seq
# -bsequence dna-align/BL02992___ylbL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02495___ylbL-BL02992___ylbL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02495___ylbL-BL02992___ylbL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02495___ylbL
# 2: BL02992___ylbL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1084
# Identity: 736/1084 (67.9%)
# Similarity: 736/1084 (67.9%)
# Gaps: 119/1084 (11.0%)
# Score: 2372.0
#
#
#=======================================
BSNT_02495___ 1 TTGCTACGTAAAAAACATTT-------TAGCTGGA-TGCTCGTCATCCTC 42
.|||| |.||||||.|.|| |.||...| |||||||.|||.||
BL02992___ylb 1 ATGCT--GAAAAAAAGAATTATACGCATCGCACTATTGCTCGTTATCATC 48
BSNT_02495___ 43 ATACTGATCGCCGTTTTATCATTTATAAAACTTCCATACTATATTACAAA 92
.|.||||...|.||||||.|.||.||.|||||.||.||.||..|
BL02992___ylb 49 ------GTGGCCGCGCTGTCATTTGTGAAGCTGCCATATTACATCACCGA 92
BSNT_02495___ 93 ACCGGGAGAAGCGACAGAGCTTG----CTTCATTGATAAAAGTGGAGGGA 138
|||.||.||||||||.|||| || || ||.||.|||||.||....
BL02992___ylb 93 ACCTGGCGAAGCGACCGAGC-TGAACCCT---TTAATTAAAGTCGATAAC 138
BSNT_02495___ 139 GGCTACCCGGAAAAAGGAAGCCTGTCCTTAATGACTGTTAAAGTGGGACC 188
|||||.||.||||||||.|||.|.||.||||||||.||||||||.||.||
BL02992___ylb 139 GGCTATCCTGAAAAAGGGAGCTTTTCTTTAATGACAGTTAAAGTCGGTCC 188
BSNT_02495___ 189 GGCTAATCCGTTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAA 238
.||.||||||.||||||||.|.||||||||.||||.||||||..|.||||
BL02992___ylb 189 TGCCAATCCGCTTACATATATATGGGCAAAAATGCGCCCTTACCACGAAA 238
BSNT_02495___ 239 TTGTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGGAGTAT 288
||.||||.||.||.|...||||..|.||||||||.||.|||.||||.|||
BL02992___ylb 239 TTCTTCCGGAAGAAAATTTTAAACAAGAAGGCGAATCTGATCAGGAATAT 288
BSNT_02495___ 289 ATGAAAAGACAGCTCCAAATGATGAAAAGCTCGCAAGAAAATGCGGTTAT 338
|||||..|.||.||.||||||||||.|...||.||.|||||||||.|.||
BL02992___ylb 289 ATGAAGCGCCAACTGCAAATGATGAGAGATTCCCAGGAAAATGCGATGAT 338
BSNT_02495___ 339 AGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCA 388
.|||||.|||.|...|||.||||||.||||||||||..|.|||||||||.
BL02992___ylb 339 CGCCGCTTATAAGCGGGCCGGAAAAGAAGTCAGCTACACGTTTAACGGCG 388
BSNT_02495___ 389 TATACGCAAGCTCTGTTGT-AGAAAACATGCCGGCAAAAGGGAAAATAGA 437
||||.||.|..||.||.|| || ...||||||.|||.|||||||||||.|
BL02992___ylb 389 TATATGCCATGTCGGTCGTCAG-CGGCATGCCTGCAGAAGGGAAAATACA 437
BSNT_02495___ 438 AGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAAC-TATCAGTCTGCT 486
||||||.||.|||||.|..|..||.||||| ||||.| |..|.|||.||.
BL02992___ylb 438 AGTCGGGGACAAAATTAAAAAAGCGGACGG-AAAATCGTTCCGGTCAGCG 486
BSNT_02495___ 487 GAAA--------AGCTA-ATTGATTATATCAGCAGCAAAAAAGCGGGAGA 527
||.| .|||| ||.||.| || ||||||||.||.||
BL02992___ylb 487 GAGAGCTTCGTCCGCTACATCGAGT-------CA--AAAAAAGCCGGGGA 527
BSNT_02495___ 528 TAAAGTCACGTTAAAGATC------------GAAAGAGAAGAAAAAGAA- 564
.|.|||.||| ||| ||.|.||||||||||..|
BL02992___ylb 528 -----CCGCGTGAAA-ATCGTAGTTGAACGGGATAAAGAAGAAAAAACAT 571
BSNT_02495___ 565 --------AAGCGTGTCACCCTTACGTTAAAACAATTTCC--TGATGAGC 604
|||| ||..| ||.||.|||.||..||| .|| ||||
BL02992___ylb 572 ATGAGATGAAGC-TGAAA-----ACATTCAAAGAAGATCCAAAGA-GAGC 614
BSNT_02495___ 605 CGGATCGGGCAGGAATCGGAGTTTCGCTTTAT-ACAGACAGAAACGTGAA 653
.|||| ||||.||.|| |.|.|| ||||||.|.||.||.||
BL02992___ylb 615 -----GGGGC-----TCGGCGTCTC-CCTCATCACAGACCGCAATGTCAA 653
BSNT_02495___ 654 GGTAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGTCCGTCAG 703
|||..||||.||..|.|||.|.||.||||||||.||.|||||.||.||.|
BL02992___ylb 654 GGTGAAGCCGGAGGTCGATATGGATATTGAAAACATCGGCGGCCCTTCGG 703
BSNT_02495___ 704 CAGGGTTAATGATGTCCCTTGAAATCTATAATCAGCTGACAAAACCAGAC 753
|||||.|.||||||||..|.||.||||||||.||||||||||||..||||
BL02992___ylb 704 CAGGGCTGATGATGTCAATGGAGATCTATAACCAGCTGACAAAAGAAGAC 753
BSNT_02495___ 754 GAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGATGG 803
||.||.|||||..||.|||||||.|||||.||.||.||.||.|..||.||
BL02992___ylb 754 GAGACGAAAGGACACCATATTGCTGGAACCGGAACGATCGACGACGAAGG 803
BSNT_02495___ 804 GAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACA 853
.|||||.||.||||||||||||||....||.||||||||.||.|||||||
BL02992___ylb 804 CAAAGTCGGTCCGATCGGCGGCATCAGCCAGAAAGTCGTTGCGGCAGACA 853
BSNT_02495___ 854 AAGCCGGAAAAGACATTTTCTTCGCGCCAAATC----------AAAACGG 893
|.||.|||...|||||.||.||.||.||.|| | ||||.||
BL02992___ylb 854 AGGCGGGAGCCGACATCTTTTTTGCCCCGAA-CGAAGGCGGAAAAAAAGG 902
BSNT_02495___ 894 CGCCAGCAATTCCGATTAT-AAGAACGCAGTAAAAACAGCAAAAGATATT 942
|.||| |.||| ||||| ||.||||||||.||||||||||||
BL02992___ylb 903 ----ATCAA-----ACTATGAAGAA-GCTGTAAAAACGGCAAAAGATATT 942
BSNT_02495___ 943 GATTCAAATATGAAGATTGTGCCTGTTGATACCATGCAGGATGCGATTGA 992
.|..|..|||||||.||.||.|||||.||.||.|||.|.|||||||||.|
BL02992___ylb 943 AAAACCGATATGAAAATCGTCCCTGTCGACACGATGGATGATGCGATTCA 992
BSNT_02495___ 993 TTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA 1026
||||||| .|||.| ||||.|||||.|||||||
BL02992___ylb 993 TTATTTG--GAAGAT-AAAGTGAAAAACACCTGA 1023
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