Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02492 and BL02991

See Amino acid alignment / Visit BSNT_02492 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence dna-align/BSNT_02492___coaD.1.5803.seq
#    -bsequence dna-align/BL02991___coaD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02492___coaD-BL02991___coaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02492___coaD-BL02991___coaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02492___coaD
# 2: BL02991___coaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 515
# Identity:     365/515 (70.9%)
# Similarity:   365/515 (70.9%)
# Gaps:          49/515 ( 9.5%)
# Score: 1287.5
# 
#
#=======================================

BSNT_02492___      1 GTGGCGAGTATAGCTGTCTGTCCCGGCAGTTTTGATCCGGTGACCTACGG     50
                     .||||.||.||.||.||.||||||||.|||||||||||||||||.|..||
BL02991___coa      1 ATGGCTAGCATTGCCGTTTGTCCCGGAAGTTTTGATCCGGTGACTTTTGG     50

BSNT_02492___     51 GCATCTGGACATCATCAAACGCGGGGCGCATATTTTTGAACAAGTGTATG    100
                     .|||.||||.|||||||..|||||||||.|..|.|||||..||||.||||
BL02991___coa     51 ACATTTGGATATCATCAGGCGCGGGGCGAAAGTGTTTGATAAAGTTTATG    100

BSNT_02492___    101 TATGTGTGCTGAATAATTCTTCAAAAAAGCCTTTGTTCAGTGTGGAAGAA    150
                     ||||.||..||||.||||||||.||.|||||..||||.|..|||||||||
BL02991___coa    101 TATGCGTTTTGAACAATTCTTCGAAGAAGCCGCTGTTTACAGTGGAAGAA    150

BSNT_02492___    151 CGGTGTGAGCTTCTGAGAGAAGTGACAAAAGACATTCCGAA----CATAA    196
                     ||.||||.|||.||..|.||||||||..|.||.||.|||||    ||   
BL02991___coa    151 CGCTGTGGGCTGCTTCGCGAAGTGACGCAGGATATCCCGAATGTGCA---    197

BSNT_02492___    197 CAGTTGAAACATCGCAAGGCCTGTTAATTGATTATGCAAAAAGAAAAAAT    246
                      |||.|||.|.|..||.||.||.||.||||||||||||||.||.||..|.
BL02991___coa    198 -AGTGGAATCTTTTCAGGGGCTTTTGATTGATTATGCAAAGAGCAAGCAG    246

BSNT_02492___    247 GCGAAA---------GCGATTTTAAGAGGCTTGAGAGCTGTATCTGATTT    287
                     || |||         |||       |.||||| |||||.||||||||.||
BL02991___coa    247 GC-AAACGTCATCCTGCG-------GGGGCTT-AGAGCGGTATCTGACTT    287

BSNT_02492___    288 TGAATACGAGATGCAGGGGACATCAGTAAACCGTGTGCTTGATGAATCTA    337
                     ||||||||||||||||||.||.||..|.|||...|||||.||||||..||
BL02991___coa    288 TGAATACGAGATGCAGGGAACCTCGATGAACAAAGTGCTCGATGAAAATA    337

BSNT_02492___    338 TTGAGACATTTTTTATGATGACAAACAATCAATATTCGTTTCTAAGTTCA    387
                     ||||.||.||||||||||||||.||.||.|||||.|||||.||.||||||
BL02991___coa    338 TTGAAACGTTTTTTATGATGACGAATAACCAATACTCGTTCCTCAGTTCA    387

BSNT_02492___    388 AGCATCGTAAAAGAAGTGGCGAGATACAACGGCTCGGTATCAGAGTTTGT    437
                     |||||.||.|||||||||||.|.|||.||.||.||.||..||||..|.||
BL02991___coa    388 AGCATTGTCAAAGAAGTGGCAAAATATAAAGGTTCAGTCGCAGAACTCGT    437

BSNT_02492___    438 ACCGCCGGAA---GTAGA-GCTGGCGCTTCAGCAAAAATT--CAGACAAG    481
                        |||||||   ||.|| ||| ||.|||.|..||||.||  ||   ||.
BL02991___coa    438 ---GCCGGAAGCGGTCGAGGCT-GCACTTGAAAAAAAGTTTGCA---AAA    480

BSNT_02492___    482 GATGA----------    486
                     .||||          
BL02991___coa    481 AATGAGCGGCCGTAA    495


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