Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02489 and BL02989
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence dna-align/BSNT_02489.1.5803.seq
# -bsequence dna-align/BL02989___ylbG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02489-BL02989___ylbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02489-BL02989___ylbG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02489
# 2: BL02989___ylbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity: 161/276 (58.3%)
# Similarity: 161/276 (58.3%)
# Gaps: 63/276 (22.8%)
# Score: 556.0
#
#
#=======================================
BSNT_02489 0 -------------------------------------------------- 0
BL02989___ylb 1 TTGGAAATCAGGCGTCAAGGTTTAATCGTTTGGCTGCACTCCTTGAAGCA 50
BSNT_02489 1 -------ATGCTGAGGAAGTTCGGGAATGTGCACTATGTATCAAAACGAT 43
|||||.|||||.|||||.|||||.||.||.||.|||||.||..
BL02989___ylb 51 GGCGAAAATGCTCAGGAAATTCGGAAATGTTCATTACGTTTCAAAGCGGC 100
BSNT_02489 44 TAAAATATGTCGTACTGTACTGTGATATGGACCAAAT--TGAAAAAACAA 91
|.||||||||.||..||||.||..||||||| |.|| .||||.||..|
BL02989___ylb 101 TGAAATATGTAGTGGTGTATTGCAATATGGA--AGATGCCGAAAGAATCA 148
BSNT_02489 92 TGGACAAGATTGCG-TCTTACTCATTTGTGAAAAAAGTGGAGCCTTCTTA 140
|.| |||.|.|.|| ||.|||||.|||||.|||.|.|||||.|.|||.||
BL02989___ylb 149 TCG-CAAAAATACGTTCGTACTCTTTTGTCAAACAGGTGGATCTTTCATA 197
BSNT_02489 141 TAAACCGTTTTTAAAATTGGAATTCGAGTCAAAGCTTGATAAGGCAAAAG 190
.|||||||||||.|||.||||.||.||.||.||||..|||||.||.||||
BL02989___ylb 198 CAAACCGTTTTTGAAAATGGAGTTTGAATCCAAGCAGGATAAAGCGAAAG 247
BSNT_02489 191 AATACGATTATAAAATCGGCATATAG 216
|||||||.||||||..|||..|.||.
BL02989___ylb 248 AATACGACTATAAAGCCGGGCTCTAA 273
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