Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02486 and BL02988

See Amino acid alignment / Visit BSNT_02486 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence dna-align/BSNT_02486___ylbE.1.5803.seq
#    -bsequence dna-align/BL02988___ylbE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02486___ylbE-BL02988___ylbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02486___ylbE-BL02988___ylbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02486___ylbE
# 2: BL02988___ylbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     189/244 (77.5%)
# Similarity:   189/244 (77.5%)
# Gaps:           8/244 ( 3.3%)
# Score: 734.0
# 
#
#=======================================

BSNT_02486___      1 ATGCGCAAAGAGGTTCAGGAATATATTTTAGCAAACGAAGAACGGAAACG     50
                     |||||.|||||.||.|||||.|||.|.||.||..|||||||.||....||
BL02988___ylb      1 ATGCGTAAAGAAGTGCAGGAGTATGTGTTCGCCGACGAAGAGCGCCGCCG     50

BSNT_02486___     51 ATTCATCAGAGAACAGCCGATATGGTACCGCAGACTTTCAAGAAAACCGG    100
                     .||||||.|.||.||||||.|.||||||||||..|||||..|.||.|||.
BL02988___ylb     51 GTTCATCCGTGAGCAGCCGGTCTGGTACCGCAAGCTTTCGCGGAATCCGA    100

BSNT_02486___    101 ATGATCTGTCCTCCTTTCAGCTTGAAATGATGAATTTTTATGAAAAAACC    150
                     ||||||||||..|||||||.||.||.|||||||||||||||||||||||.
BL02988___ylb    101 ATGATCTGTCAGCCTTTCATCTCGATATGATGAATTTTTATGAAAAAACG    150

BSNT_02486___    151 ATTCCGCATCGGGTGAACCAGTTTACGAACGGG----ATTCAAATGGCGC    196
                     |||||.||..||||.||||||||    |.||||    |||||.|||||.|
BL02988___ylb    151 ATTCCTCACAGGGTCAACCAGTT----ATCGGGCAGCATTCAGATGGCCC    196

BSNT_02486___    197 AAATGATGATGCAAATGTTTCAAGCGATGCGGACAAAAGATTAA    240
                     |.||||||.|||||||||||||.||||||||.||..|.||||||
BL02988___ylb    197 AGATGATGCTGCAAATGTTTCATGCGATGCGCACTCAGGATTAA    240


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