Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02483 and BL02986
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence dna-align/BSNT_02483___ylbC.1.5803.seq
# -bsequence dna-align/BL02986___ylbC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02483___ylbC-BL02986___ylbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02483___ylbC-BL02986___ylbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02483___ylbC
# 2: BL02986___ylbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1083
# Identity: 733/1083 (67.7%)
# Similarity: 733/1083 (67.7%)
# Gaps: 81/1083 ( 7.5%)
# Score: 2274.5
#
#
#=======================================
BSNT_02483___ 1 TTGAAAAATATATTGAGAGCAATGGTTATCCTTTTGATTATCTGCGGAAC 50
||||||||||||||.|||||..|.||.||||||.|.||..| |||||
BL02986___ylb 1 TTGAAAAATATATTAAGAGCGGTCGTGATCCTTCTCATCGT-TGCGG--- 46
BSNT_02483___ 51 CT------ATGTTCTGTTTATTCAATATGGATCTGTTCCTGAAAAGAAAT 94
|| |.| ||||||||||||||.||.||....|||||.| ||||
BL02986___ylb 47 CTTCATACACG--CTGTTTATTCAATACGGCTCAACGCCTGAGA--AAAT 92
BSNT_02483___ 95 --CAAATGACAG-CGAGCCTCAGGTGTCGAATGAGGAAGCGCAAAGCGGC 141
|.||.|| || |.||||.||.||.||.||.||.||.||..|||
BL02986___ylb 93 TGCGAAGGA-AGACAAGCCGCAAGTCTCAAACGAAGATGCAAAAA----- 136
BSNT_02483___ 142 AAACGAA-------TACATATGCCGACTTCAGGGTTATTGTCCTTCAT-G 183
||..||| .|||| |.|||| |||.||..|..|.|||||.|| |
BL02986___ylb 137 AAGAGAAGCCCTTGAACAT-TCCCGA-TTCCGGCCTGCTTTCCTTTATCG 184
BSNT_02483___ 184 GGCAAGCCCGCCGATGAAGTAACGAAA--AAGCTTGGGGAACCTGAACGT 231
||.|| .|.||||| ||.| |.||||| ||.||.|||.||||.||..|.
BL02986___ylb 185 GGGAA-TCGGCCGA-GACG-ATCGAAAAGAAACTGGGGAAACCGGACAGA 231
BSNT_02483___ 232 ATTGACCCTTCGGCTTATGATTACGATTGGTGGGTATACAATCAAGGTAA 281
.|.||.|||||.||.||||||||.||.||||||||.||.||.|||||.||
BL02986___ylb 232 GTCGATCCTTCAGCGTATGATTATGAATGGTGGGTCTATAACCAAGGGAA 281
BSNT_02483___ 282 GGATCAATATATCCAAATCG-------GGGTATTAAACAATAAAGTGGTC 324
..|.||.||..|.||||||| ||| |...||.|..||.
BL02986___ylb 282 AAAACAGTACGTTCAAATCGGCTTGCTGGG-------CGGCAAGGCTGTG 324
BSNT_02483___ 325 ACATTATTCGCGTCGGGTAATGATATTAACGCCAAGCCTTTCAAAATTGG 374
|||||.||.|||.|.||..|.|...|.|||.||...||.||.|||||.||
BL02986___ylb 325 ACATTGTTTGCGACAGGCGACGGGGTGAACACCGCTCCGTTTAAAATCGG 374
BSNT_02483___ 375 A-----GAATCAACTGGCGAAGTATTCAAGACCACCCAGGTGGCACCATT 419
| | |||| |.|||||.|||||.||.||||||.|.||.||.|.
BL02986___ylb 375 ACGGCCG--TCAA---GGGAAGTTTTCAAAACGACCCAGATCGCCCCGTA 419
BSNT_02483___ 420 TGTGAATGTAGAGTATAAAGGAAATTCCTATCGGTTTGAATTTTCTGAAG 469
|||.|||||..|.||||||||.|.|||.||.||.|||||.|||||.||.|
BL02986___ylb 420 TGTCAATGTTCAATATAAAGGCAGTTCATACCGTTTTGAGTTTTCCGAGG 469
BSNT_02483___ 470 AGGATATCAATACAAGACCGACTGTAAAGGTAGGAAAGATGTATGTCCAG 519
|.|||||.||||||||.|||||.||.||.||.|||.|.||.|||||.|||
BL02986___ylb 470 AAGATATGAATACAAGGCCGACGGTTAAAGTCGGAGACATCTATGTTCAG 519
BSNT_02483___ 520 CTGTATATGGACAAATTTGAGGGGAAGCTATCCAGCATCAGGGCGTTTGA 569
|||||.|||||.|||||.|||||||.|||.||.|||||||||||.|||||
BL02986___ylb 520 CTGTACATGGATAAATTCGAGGGGACGCTTTCAAGCATCAGGGCATTTGA 569
BSNT_02483___ 570 TGCGCAGACCTTTGTAAAGCAAAGACCTTATGAGGTAGTGTACCGCGGGG 619
|||||.|||.||..|.||||||||.||.|||||.||.||.|||.|.||..
BL02986___ylb 570 TGCGCCGACTTTAATCAAGCAAAGGCCGTATGAAGTTGTCTACAGAGGCA 619
BSNT_02483___ 620 AATTAATTAAACCGAAAGCCGTTTCAGATGAGAAATGGAAAAAGATCCAA 669
...|.||..|.||.|||||..|..||||...|.|.|||||.||.|||.|.
BL02986___ylb 620 CCCTGATCGAGCCTAAAGCATTGACAGAATCGGATTGGAAGAAAATCGAG 669
BSNT_02483___ 670 ACAACGAGCGAAAAGCAAATCCTTGATTTGACGAATGTCATACGCGTTAA 719
|.|.|.|..||.|||||.||..|||||.|.||.||.||.||.||||..|.
BL02986___ylb 670 AAAGCAAATGAGAAGCAGATTTTTGATATAACAAACGTTATCCGCGCAAG 719
BSNT_02483___ 720 ACACGGACTTGCGAAGCTTGAGTGGGATCA--GC----CAACGGCGGAAG 763
.|||||.||..|..||||....||||||.| || ||| |||
BL02986___ylb 720 GCACGGCCTGTCTGAGCTCACTTGGGATGAAGGCGTATCAA------AAG 763
BSNT_02483___ 764 TGGCATTTGGACATAGTGAG-GATATGAAGGAAAATAATTATTTCTCCCA 812
||||.|..||.||.|| .|| ||.|||||.||..|..||||.||||||||
BL02986___ylb 764 TGGCTTACGGCCACAG-CAGCGACATGAAAGAGCACCATTACTTCTCCCA 812
BSNT_02483___ 813 TGTCTCTAAAAAATACGGCTCGCTGAAAGAC-CGCTTAGAAGAAGGGCAT 861
|||.||..|||...|.|||.|.||.|||||| .|||| |||.||||..|.
BL02986___ylb 813 TGTGTCAGAAACGGAAGGCACCCTCAAAGACAGGCTT-GAAAAAGGAAAA 861
BSNT_02483___ 862 GTTGACTTTCAGCAAGCGGGAGAAAATATCGCATACAATTATGTGGACGG 911
||..|.|||.||||.|||||.|||||||||||...|||.|||||.|||||
BL02986___ylb 862 GTCAATTTTGAGCAGGCGGGGGAAAATATCGCGCTCAACTATGTCGACGG 911
BSNT_02483___ 912 TCCGGCTGCTGTAGAAGGCTGGCTGAATAGCGAAGGCCATCGAAAAGCGC 961
.||.||.||.||.|||||||||.|.||.||||||||.||..|||||||||
BL02986___ylb 912 GCCTGCGGCGGTTGAAGGCTGGTTAAACAGCGAAGGGCACAGAAAAGCGC 961
BSNT_02483___ 962 TTCTGAATTCAGATTATACGCATCTTGGTGTCGGAGTAGACCGGAAATAT 1011
|..|.|||.|.||.|||||.|||||.||.|||||.||.||...|||||||
BL02986___ylb 962 TCTTAAATGCCGACTATACCCATCTCGGCGTCGGGGTGGATGAGAAATAT 1011
BSNT_02483___ 1012 TACACCCAAAATTTTATTAAGCGATGGTAA--- 1041
||.||.|||||.||||||||...||||.||
BL02986___ylb 1012 TATACGCAAAACTTTATTAAAGAATGGCAATAG 1044
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