Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02483 and BL02986

See Amino acid alignment / Visit BSNT_02483 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence dna-align/BSNT_02483___ylbC.1.5803.seq
#    -bsequence dna-align/BL02986___ylbC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02483___ylbC-BL02986___ylbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02483___ylbC-BL02986___ylbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02483___ylbC
# 2: BL02986___ylbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1083
# Identity:     733/1083 (67.7%)
# Similarity:   733/1083 (67.7%)
# Gaps:          81/1083 ( 7.5%)
# Score: 2274.5
# 
#
#=======================================

BSNT_02483___      1 TTGAAAAATATATTGAGAGCAATGGTTATCCTTTTGATTATCTGCGGAAC     50
                     ||||||||||||||.|||||..|.||.||||||.|.||..| |||||   
BL02986___ylb      1 TTGAAAAATATATTAAGAGCGGTCGTGATCCTTCTCATCGT-TGCGG---     46

BSNT_02483___     51 CT------ATGTTCTGTTTATTCAATATGGATCTGTTCCTGAAAAGAAAT     94
                     ||      |.|  ||||||||||||||.||.||....|||||.|  ||||
BL02986___ylb     47 CTTCATACACG--CTGTTTATTCAATACGGCTCAACGCCTGAGA--AAAT     92

BSNT_02483___     95 --CAAATGACAG-CGAGCCTCAGGTGTCGAATGAGGAAGCGCAAAGCGGC    141
                       |.||.|| || |.||||.||.||.||.||.||.||.||..|||     
BL02986___ylb     93 TGCGAAGGA-AGACAAGCCGCAAGTCTCAAACGAAGATGCAAAAA-----    136

BSNT_02483___    142 AAACGAA-------TACATATGCCGACTTCAGGGTTATTGTCCTTCAT-G    183
                     ||..|||       .|||| |.|||| |||.||..|..|.|||||.|| |
BL02986___ylb    137 AAGAGAAGCCCTTGAACAT-TCCCGA-TTCCGGCCTGCTTTCCTTTATCG    184

BSNT_02483___    184 GGCAAGCCCGCCGATGAAGTAACGAAA--AAGCTTGGGGAACCTGAACGT    231
                     ||.|| .|.||||| ||.| |.|||||  ||.||.|||.||||.||..|.
BL02986___ylb    185 GGGAA-TCGGCCGA-GACG-ATCGAAAAGAAACTGGGGAAACCGGACAGA    231

BSNT_02483___    232 ATTGACCCTTCGGCTTATGATTACGATTGGTGGGTATACAATCAAGGTAA    281
                     .|.||.|||||.||.||||||||.||.||||||||.||.||.|||||.||
BL02986___ylb    232 GTCGATCCTTCAGCGTATGATTATGAATGGTGGGTCTATAACCAAGGGAA    281

BSNT_02483___    282 GGATCAATATATCCAAATCG-------GGGTATTAAACAATAAAGTGGTC    324
                     ..|.||.||..|.|||||||       |||       |...||.|..||.
BL02986___ylb    282 AAAACAGTACGTTCAAATCGGCTTGCTGGG-------CGGCAAGGCTGTG    324

BSNT_02483___    325 ACATTATTCGCGTCGGGTAATGATATTAACGCCAAGCCTTTCAAAATTGG    374
                     |||||.||.|||.|.||..|.|...|.|||.||...||.||.|||||.||
BL02986___ylb    325 ACATTGTTTGCGACAGGCGACGGGGTGAACACCGCTCCGTTTAAAATCGG    374

BSNT_02483___    375 A-----GAATCAACTGGCGAAGTATTCAAGACCACCCAGGTGGCACCATT    419
                     |     |  ||||   |.|||||.|||||.||.||||||.|.||.||.|.
BL02986___ylb    375 ACGGCCG--TCAA---GGGAAGTTTTCAAAACGACCCAGATCGCCCCGTA    419

BSNT_02483___    420 TGTGAATGTAGAGTATAAAGGAAATTCCTATCGGTTTGAATTTTCTGAAG    469
                     |||.|||||..|.||||||||.|.|||.||.||.|||||.|||||.||.|
BL02986___ylb    420 TGTCAATGTTCAATATAAAGGCAGTTCATACCGTTTTGAGTTTTCCGAGG    469

BSNT_02483___    470 AGGATATCAATACAAGACCGACTGTAAAGGTAGGAAAGATGTATGTCCAG    519
                     |.|||||.||||||||.|||||.||.||.||.|||.|.||.|||||.|||
BL02986___ylb    470 AAGATATGAATACAAGGCCGACGGTTAAAGTCGGAGACATCTATGTTCAG    519

BSNT_02483___    520 CTGTATATGGACAAATTTGAGGGGAAGCTATCCAGCATCAGGGCGTTTGA    569
                     |||||.|||||.|||||.|||||||.|||.||.|||||||||||.|||||
BL02986___ylb    520 CTGTACATGGATAAATTCGAGGGGACGCTTTCAAGCATCAGGGCATTTGA    569

BSNT_02483___    570 TGCGCAGACCTTTGTAAAGCAAAGACCTTATGAGGTAGTGTACCGCGGGG    619
                     |||||.|||.||..|.||||||||.||.|||||.||.||.|||.|.||..
BL02986___ylb    570 TGCGCCGACTTTAATCAAGCAAAGGCCGTATGAAGTTGTCTACAGAGGCA    619

BSNT_02483___    620 AATTAATTAAACCGAAAGCCGTTTCAGATGAGAAATGGAAAAAGATCCAA    669
                     ...|.||..|.||.|||||..|..||||...|.|.|||||.||.|||.|.
BL02986___ylb    620 CCCTGATCGAGCCTAAAGCATTGACAGAATCGGATTGGAAGAAAATCGAG    669

BSNT_02483___    670 ACAACGAGCGAAAAGCAAATCCTTGATTTGACGAATGTCATACGCGTTAA    719
                     |.|.|.|..||.|||||.||..|||||.|.||.||.||.||.||||..|.
BL02986___ylb    670 AAAGCAAATGAGAAGCAGATTTTTGATATAACAAACGTTATCCGCGCAAG    719

BSNT_02483___    720 ACACGGACTTGCGAAGCTTGAGTGGGATCA--GC----CAACGGCGGAAG    763
                     .|||||.||..|..||||....||||||.|  ||    |||      |||
BL02986___ylb    720 GCACGGCCTGTCTGAGCTCACTTGGGATGAAGGCGTATCAA------AAG    763

BSNT_02483___    764 TGGCATTTGGACATAGTGAG-GATATGAAGGAAAATAATTATTTCTCCCA    812
                     ||||.|..||.||.|| .|| ||.|||||.||..|..||||.||||||||
BL02986___ylb    764 TGGCTTACGGCCACAG-CAGCGACATGAAAGAGCACCATTACTTCTCCCA    812

BSNT_02483___    813 TGTCTCTAAAAAATACGGCTCGCTGAAAGAC-CGCTTAGAAGAAGGGCAT    861
                     |||.||..|||...|.|||.|.||.|||||| .|||| |||.||||..|.
BL02986___ylb    813 TGTGTCAGAAACGGAAGGCACCCTCAAAGACAGGCTT-GAAAAAGGAAAA    861

BSNT_02483___    862 GTTGACTTTCAGCAAGCGGGAGAAAATATCGCATACAATTATGTGGACGG    911
                     ||..|.|||.||||.|||||.|||||||||||...|||.|||||.|||||
BL02986___ylb    862 GTCAATTTTGAGCAGGCGGGGGAAAATATCGCGCTCAACTATGTCGACGG    911

BSNT_02483___    912 TCCGGCTGCTGTAGAAGGCTGGCTGAATAGCGAAGGCCATCGAAAAGCGC    961
                     .||.||.||.||.|||||||||.|.||.||||||||.||..|||||||||
BL02986___ylb    912 GCCTGCGGCGGTTGAAGGCTGGTTAAACAGCGAAGGGCACAGAAAAGCGC    961

BSNT_02483___    962 TTCTGAATTCAGATTATACGCATCTTGGTGTCGGAGTAGACCGGAAATAT   1011
                     |..|.|||.|.||.|||||.|||||.||.|||||.||.||...|||||||
BL02986___ylb    962 TCTTAAATGCCGACTATACCCATCTCGGCGTCGGGGTGGATGAGAAATAT   1011

BSNT_02483___   1012 TACACCCAAAATTTTATTAAGCGATGGTAA---   1041
                     ||.||.|||||.||||||||...||||.||   
BL02986___ylb   1012 TATACGCAAAACTTTATTAAAGAATGGCAATAG   1044


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