Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02482 and BL02985
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence dna-align/BSNT_02482___ylbB.1.5803.seq
# -bsequence dna-align/BL02985___ylbB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02482___ylbB-BL02985___ylbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02482___ylbB-BL02985___ylbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02482___ylbB
# 2: BL02985___ylbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 306/490 (62.4%)
# Similarity: 306/490 (62.4%)
# Gaps: 86/490 (17.6%)
# Score: 848.0
#
#
#=======================================
BSNT_02482___ 1 ATGACAAAAATAAAAGATCTGATGACAGCCGA---CTTGCAATATTGCAC 47
.|||||....|.||||||.|.||||||...|| .|| ||||||.||
BL02985___ylb 1 TTGACACGTGTGAAAGATATCATGACAAAGGAAACATT---ATATTGTAC 47
BSNT_02482___ 48 GGTATTAGATAATGTATATGAAGCTGCAGTAAAGATGAAGGACGCAAATG 97
|||..|.|||||||||||.||.|||||.||.||.|||||.||||...|||
BL02985___ylb 48 GGTTCTTGATAATGTATACGAGGCTGCCGTGAAAATGAAAGACGGGGATG 97
BSNT_02482___ 98 TAGGAGCGATACCGGTAG---TTGATGAGGACGGGGAAACATTGGTCGGC 144
|.||||||||.|||||.| |||||||.|.|..||| |.||||.||.
BL02985___ylb 98 TGGGAGCGATTCCGGTTGTGCTTGATGACGGCTTGGA---ACTGGTTGGG 144
BSNT_02482___ 145 ATCGTAACCGACCGCGATCTCGTATTAAGAGGAATCGCCATC-AAAAAAC 193
|||||.||.|||||.|||.|.||..|..|.||||||| ||.| |||||||
BL02985___ylb 145 ATCGTCACTGACCGGGATTTAGTGCTGCGGGGAATCG-CAGCTAAAAAAC 193
BSNT_02482___ 194 CGAACTCGCAAAAAATCAC---TGACGCGATGACCGAAAAACCTGTCAGT 240
||||.|||||||||||.|| ||.|..||.|||.|| |.|||.|
BL02985___ylb 194 CGAATTCGCAAAAAATTACAAATGTCATGACGACTGA------TCTCATT 237
BSNT_02482___ 241 GTGG--AG-GAAGATGCTTCAGTCG---ATGAGGTTCTTC-ATTTGATGG 283
..|| || |||||.|.||||.|.| |.|.|| || ||.|.||||
BL02985___ylb 238 ACGGTAAGTGAAGACGATTCAATTGAAAAAGCGG----TCGATCTCATGG 283
BSNT_02482___ 284 CATCGCATCAGCTCAGAAGGATACCAGTTACA-----AAAAATAAAAAAC 328
.|....|||||.||||||||.|.||.|||||| | ||||..|
BL02985___ylb 284 GAGATTATCAGATCAGAAGGGTCCCGGTTACACGGGGA-----AAAACGC 328
BSNT_02482___ 329 TGACTGGAATTGTCACGCTTGGTGATCTTTCTTTATCTGAGCA-AACGAA 377
|..|.||.||..|.|||||.||.|||.|||| |.|| || ||..||
BL02985___ylb 329 TTGCCGGCATCATTACGCTCGGCGATGTTTC---AACT---CACAATAAA 372
BSNT_02482___ 378 T-GAAC-----GTGCCGGCAGCGC-CTTATCGGATATTTCCGAAGGTGAT 420
| |||| | ||.|||..||| || ||.|||| ||
BL02985___ylb 373 TCGAACCGCCAG-GCTGGCGACGCGCT-----GACATTT---------AT 407
BSNT_02482___ 421 A----ATAGAGAAGA---------AGGTTTTTTTCATTAA 447
| |.|..||||| ||.||||.||||||||
BL02985___ylb 408 ATCTGAAAACGAAGAGCGGCCTGGAGATTTTCTTCATTAA 447
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