Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02478 and BL02983

See Amino acid alignment / Visit BSNT_02478 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence dna-align/BSNT_02478___ctaF.1.5803.seq
#    -bsequence dna-align/BL02983___ctaF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02478___ctaF-BL02983___ctaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02478___ctaF-BL02983___ctaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02478___ctaF
# 2: BL02983___ctaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     237/345 (68.7%)
# Similarity:   237/345 (68.7%)
# Gaps:          27/345 ( 7.8%)
# Score: 790.5
# 
#
#=======================================

BSNT_02478___      1 ATGGTCGATAAAAAAAGCAGAGGGCATATCAATAGCGACCTTG-------     43
                     |||||..||||..|||.|||||||.||..|||.|..||.||||       
BL02983___cta      1 ATGGTGAATAACGAAAACAGAGGGAATCCCAAAACAGATCTTGCCTACCG     50

BSNT_02478___     44 --AATTTAAGAAAAAAAAGCATACCCGAGAG---ATGAAATATCAAGTCC     88
                       ||   |||||||        ||.|| |||   ||||.||||||.||..
BL02983___cta     51 CAAA---AAGAAAA--------ACGCG-GAGGACATGAGATATCAGGTTA     88

BSNT_02478___     89 TGTCTTTTGGTTTAATGATCGGTCTTACGATTGTTGCATTTCTGACTGTG    138
                     |.||.||.|||||.||||||||.||.||.|||||.||.|||.|.||.||.
BL02983___cta     89 TTTCATTCGGTTTGATGATCGGCCTGACCATTGTCGCTTTTTTAACGGTC    138

BSNT_02478___    139 GCCACGGACGGTGTCGGCAGCTGGTTTACGATTCCTTTCATTATTTTGCT    188
                     |||.|.||   ||.||||...|||||||||.|.||.||.|||.|..||||
BL02983___cta    139 GCCTCAGA---TGCCGGCGTATGGTTTACGGTGCCGTTTATTCTGCTGCT    185

BSNT_02478___    189 AGCTGCAATTCAAGTCATCTTTCAGCTGTATTATTTCATGCATATGAATC    238
                     .||.|..|||||.||....||||||||||||||.||.||||||||||.||
BL02983___cta    186 CGCCGTCATTCAGGTTGCGTTTCAGCTGTATTACTTTATGCATATGAGTC    235

BSNT_02478___    239 AGAAAGGGCATGAGGCGCCGGCACTGTTTTTGTATTCAGGGGTGTTTGTC    288
                     ||...||||||||.||||||.|..||||..|.|||||.||.||.||.|||
BL02983___cta    236 AGCGGGGGCATGAAGCGCCGACTTTGTTCCTTTATTCGGGCGTTTTGGTC    285

BSNT_02478___    289 GCGTTTATCACTGTGCTTGCGTTTGTGACAATTATATGGTGGTAA    333
                     ||.|||.|.||.|||.|.||.|||||.||..|.||.|||||||||
BL02983___cta    286 GCTTTTGTTACCGTGTTGGCTTTTGTAACGCTAATCTGGTGGTAA    330


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