Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02477 and BL02982
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence dna-align/BSNT_02477___ctaE.1.5803.seq
# -bsequence dna-align/BL02982___ctaE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02477___ctaE-BL02982___ctaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02477___ctaE-BL02982___ctaE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02477___ctaE
# 2: BL02982___ctaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 641
# Identity: 477/641 (74.4%)
# Similarity: 477/641 (74.4%)
# Gaps: 34/641 ( 5.3%)
# Score: 1772.0
#
#
#=======================================
BSNT_02477___ 1 ATGCA---AGTTCAAGAAAAATTCACCGCAGAAACCTTTCCAGCTTCTCC 47
||||| || ||||.|||||.||.||.||||||||.||.||||||||
BL02982___cta 1 ATGCATACAG---AAGAGAAATTGACGGCTGAAACCTTCCCGGCTTCTCC 47
BSNT_02477___ 48 CGAAAAAGTAACCCTGGAAGGGAAAAATAAATTTTTAGGCTTTTGGCTTT 97
.|||||||..||..|.|||||.||||||||||||.|.|||||||||||.|
BL02982___cta 48 TGAAAAAGCTACGTTAGAAGGAAAAAATAAATTTATCGGCTTTTGGCTAT 97
BSNT_02477___ 98 TTCTTGGCGGAGAGACTGTTCTGTTTGCGTCTCTCTTCGCCACGTTTCTT 147
||||.||.||||||||.|||||.||.||||||||||||||.||.|..|||
BL02982___cta 98 TTCTCGGGGGAGAGACGGTTCTTTTCGCGTCTCTCTTCGCAACATACCTT 147
BSNT_02477___ 148 GCGCTTCGGAATTCAAATGCCGGTGATCCGCCTACGACGGAAATGTTCGA 197
|||||...||||||.|||||.||.|..|||...|||||.||.||||||||
BL02982___cta 148 GCGCTGAAGAATTCGAATGCAGGGGGGCCGAAAACGACCGAGATGTTCGA 197
BSNT_02477___ 198 TGTGACACTTGTATTCATTGCCACAATGCTTCTATTAACGAGCAGTTTAA 247
..||...||.||.||..||||.||||||||.||.||.|||||||||||.|
BL02982___cta 198 CATGGGGCTGGTCTTTCTTGCGACAATGCTCCTTTTGACGAGCAGTTTGA 247
BSNT_02477___ 248 CGAGTGTGTACGCGATGTACCACATGAAGAACTTTTCCTTCGGCAAGATG 297
||||.|||||.||||||||.||.|||||.|||||..|.||....||||||
BL02982___cta 248 CGAGCGTGTATGCGATGTATCATATGAAAAACTTCGCTTTTAAAAAGATG 297
BSNT_02477___ 298 CAGCTTTGGCTGGGAATTACGATTTTATTGGGGGCCGGCTTTTTAGGACT 347
|||.|||||||.|||||.||..||.|..|.||.||.||||||.|.|..||
BL02982___cta 298 CAGGTTTGGCTCGGAATCACCGTTCTGCTCGGTGCAGGCTTTCTGGCGCT 347
BSNT_02477___ 348 GGAAATCTATGAGTTCAAGCATTACACCCATGAATTTGGCTTTACCA-TC 396
.|||||.||||||||||.||||||||..||.||||.|||.||.|||| ||
BL02982___cta 348 TGAAATATATGAGTTCACGCATTACATTCACGAATATGGGTTCACCATTC 397
BSNT_02477___ 397 ACAAGCTCTGCCCTTGGTTCTGCGTTTTACACGCTTGTCGGTACACACGG 446
| ||||||.||.||.||.||.||.|||||.|||||||||||.||||||||
BL02982___cta 398 A-AAGCTCGGCTCTCGGCTCCGCTTTTTATACGCTTGTCGGCACACACGG 446
BSNT_02477___ 447 CGCCCACGTGGCATTTGGGCTTATGTGGATCAGCACGCTT------ATGA 490
.||.|||||..|.||.||||||.|.||||| .||| ||||
BL02982___cta 447 AGCACACGTTACCTTCGGGCTTCTCTGGAT------TCTTTCTTTGATGA 490
BSNT_02477___ 491 TCCGCAATGCTAAGAGAGGGC-------TGAATCTGTATACGGCGCCTAA 533
||.|.||||| |||| |.|..||.||.|..|||||.||
BL02982___cta 491 TCAGAAATGC-------GGGCCGCGGATTAAGCCTTTACAACGCGCCGAA 533
BSNT_02477___ 534 GTTTTACGTTGCCAGCCTTTATTGGCACTTTATTGATGTCGTGTGGGTCT 583
|||||..||.||.|||||.||.|||||.|||||.||.||.||.|||||.|
BL02982___cta 534 GTTTTTTGTCGCAAGCCTCTACTGGCATTTTATCGACGTTGTCTGGGTGT 583
BSNT_02477___ 584 TCATCTTTACCGTTGTATATTTAATGGGGATGGTGGGATAA 624
|.|||||||||||||||||.||.||||||||||||||||||
BL02982___cta 584 TTATCTTTACCGTTGTATACTTGATGGGGATGGTGGGATAA 624
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