Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02475 and BL02980
See
Amino acid alignment /
Visit
BSNT_02475 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence dna-align/BSNT_02475___ctaC.1.5803.seq
# -bsequence dna-align/BL02980___ctaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02475___ctaC-BL02980___ctaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02475___ctaC-BL02980___ctaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02475___ctaC
# 2: BL02980___ctaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1109
# Identity: 770/1109 (69.4%)
# Similarity: 770/1109 (69.4%)
# Gaps: 79/1109 ( 7.1%)
# Score: 2516.0
#
#
#=======================================
BSNT_02475___ 1 ATGGTAAAGCATTGGCGTCTTAT-------TTTATTATTAGCCTTAGTGC 43
|||.|||||.|.||||||||.|| ||.|.|||| .||.
BL02980___cta 1 ATGTTAAAGAAATGGCGTCTGATGTCGCTGTTCACTATT-------TTGG 43
BSNT_02475___ 44 CGCTTCTATTAAGC-GGATGTGGAAAACCTTTTTTATCCACGCTCAAGCC 92
|||||.| ||.||| ||.||.|||.||||.|||.||||.|||||..||||
BL02980___cta 44 CGCTTGT-TTTAGCAGGGTGCGGAGAACCGTTTATATCAACGCTGCAGCC 92
BSNT_02475___ 93 TGCTGGCGAGGTGGCTGATAAACAGTTTGACCTGACAGTGCTCAGCACAT 142
.||.|||||||||||||||.|.||||.|..|||.|...|.||||||||..
BL02980___cta 93 GGCGGGCGAGGTGGCTGATCAGCAGTATTTCCTAATGATTCTCAGCACGC 142
BSNT_02475___ 143 TGATTATGGTGGTTGTTGTTGCAGTAGTATCTGTTATCTTCTTTTATGTG 192
||||.|||||.||||||||.|.|||.|||..|.|.||.|||.|.|.|||.
BL02980___cta 143 TGATCATGGTTGTTGTTGTAGTAGTGGTAAGTTTCATTTTCGTATTTGTC 192
BSNT_02475___ 193 ATTGTGAGATTCAGAAGATCACGGGTCGGTGA-GAACACGATACCGAAAC 241
||.||.|..|.|||||||||...|.||||||| ||.||| ||.|||||||
BL02980___cta 193 ATCGTCAAGTACAGAAGATCTAAGCTCGGTGATGACCAC-ATCCCGAAAC 241
BSNT_02475___ 242 AGGTAGAGGGGAA---TAAATTTTTAGAAATCACATGGACCGTGATCCCG 288
||||.||.||.|| .|| |||||||||...||||||.||.||.|||
BL02980___cta 242 AGGTTGAAGGAAACCGCAA---TTTAGAAATTTTATGGACTGTTATTCCG 288
BSNT_02475___ 289 ATTTTGCTGCTCATTATTCTTGTGATTCCTGTTGTATTATATACGCTAGA 338
|||.|.||.||..||||.||.||..||||||||||...|.|.||..|.||
BL02980___cta 289 ATTATCCTCCTTCTTATCCTGGTTGTTCCTGTTGTCGCACAGACCTTTGA 338
BSNT_02475___ 339 GCTAGCGGACACATCACCAATGGATAAAAAA-----GG--CCGCAAAGCT 381
.||.||.||.||...|||.||||||||.||| || |||.|
BL02980___cta 339 TCTTGCTGATACGAAACCGATGGATAAGAAAAACAGGGATCCGGA----- 383
BSNT_02475___ 382 GAGGATGCTCTTGTAGTCAATGTTAGGGCAAATTTATACTGGTGGGAGTT 431
||.||.|||| ||.|||||.||..||||.||..|.|||||||||||.||
BL02980___cta 384 GAAGACGCTC--GTCGTCAACGTGCGGGCGAACCTTTACTGGTGGGAATT 431
BSNT_02475___ 432 TGAGTACCCTGATTACGACATTATCACAAGCCAGGAGCTGATTGTACCGA 481
.||.||.|||||.||||.|.|.||.||.||||||||||||.|.||.||||
BL02980___cta 432 CGAATATCCTGACTACGGCGTGATTACGAGCCAGGAGCTGGTCGTGCCGA 481
BSNT_02475___ 482 CAGATCAGCGTGTATATTTTAATTTAAAAGCCTCTGATGTAAAACATTCC 531
|.|||.|.||..|.||.||.||..|.|||||.||.|||||.||||||||.
BL02980___cta 482 CCGATGAACGCATTTACTTCAAGCTGAAAGCTTCCGATGTCAAACATTCA 531
BSNT_02475___ 532 TTCTGGATTCCTTCAGTTGGAGGAAAACTTGATACGAATACGGATAATGA 581
||||||||||||||.||.||.||.||..||||||||||.||.||.|||||
BL02980___cta 532 TTCTGGATTCCTTCTGTCGGGGGCAAGGTTGATACGAACACAGACAATGA 581
BSNT_02475___ 582 AAATAAGTTCTTCCTGACATTTGATTCAAAACGAAGC--AAAGAGGCAGG 629
|||.|||||||.|.|.||..||||||||||||| .|| ||| |.||.||
BL02980___cta 582 AAACAAGTTCTACTTAACGATTGATTCAAAACG-GGCGGAAA-AAGCCGG 629
BSNT_02475___ 630 AGA-TATGTTTTTTGGGAAGTGTGCAGAGCTTTGCGGCCCTTCACATGCG 678
||| ||| ||.|..|||||.||.||.|||||.|||||.|||||.||.||.
BL02980___cta 630 AGACTAT-TTCTACGGGAAATGCGCCGAGCTCTGCGGACCTTCCCACGCT 678
BSNT_02475___ 679 CTGATGGATTTTAAGGTGAAGACGATGTCTGCAAAAGAAT---TTC-AGG 724
.|.|||||.|||||.||.||..||.|.|| .|||.|| ||| ||.
BL02980___cta 679 TTAATGGACTTTAAAGTTAAAGCGGTTTC----GAAGGATGAGTTCAAGA 724
BSNT_02475___ 725 GCTGGACAAAAGAAATGAAAAACTATAAATCTACAGCAGAGAGCGATTTG 774
..||||..|..||.|||.|||||.|||||.|...|||..|.|.||||.|.
BL02980___cta 725 AATGGATGAGCGATATGGAAAACAATAAAGCGGAAGCGAAAACCGATCTC 774
BSNT_02475___ 775 GCT----AAGCAGGGTGAAGAACTGTTTAAAGAGAAAAACTGCCTGAGCT 820
||| || ||.|||.|..||||.||||||||||||||||||||||
BL02980___cta 775 GCTGTTGAA----GGAGAAAAGGTGTTCAAAGAGAAAAACTGCCTGAGCT 820
BSNT_02475___ 821 GCCATGCGGTAGAGCCGAATGATAAG-----CGTGCAGAAGCCGCTAGAA 865
|.|||||| .||||.|.|.||| .|.||.|||||.||.||||
BL02980___cta 821 GTCATGCG-----ACCGATTCAAAAGACCAAAGGGCGGAAGCGGCCAGAA 865
BSNT_02475___ 866 CGGCACCTAACTTGGCGACCTTCGGTGAAAGGACAAAAGTGGCAGGGGTG 915
||||.||.|||.|.|||||.||.||.||.|||.|.|...|.||.||.|||
BL02980___cta 866 CGGCTCCGAACCTCGCGACTTTTGGAGACAGGTCGACGATCGCCGGCGTG 915
BSNT_02475___ 916 AAAGAGGCCAACAAAGAAAATGTGAAGGCTTGGCTAAAGGACCCTGACAG 965
||.||...||||.|.|||||..||||.||.|||||.|||||.|||||.||
BL02980___cta 916 AAGGAATTCAACGATGAAAACTTGAAAGCGTGGCTCAAGGATCCTGAAAG 965
BSNT_02475___ 966 CATAAAGCCGGGGAACAAAATGACAGGCACATATCCAAAGCTCTCA--GA 1013
||||||.|||||.|||||||||||.||||||||.|| .|.|.|.| ||
BL02980___cta 966 CATAAAACCGGGCAACAAAATGACCGGCACATACCC--TGATTTGAGCGA 1013
BSNT_02475___ 1014 CAGCGAAACAGATGCGCTTTATGAATACTTAAAAGGCTTAAAAGCGGAA- 1062
||..|||...|||||.||...||||||.|||||.||.||||||.|.|||
BL02980___cta 1014 CAAGGAACTTGATGCACTGACTGAATATTTAAAGGGGTTAAAAACCGAAG 1063
BSNT_02475___ 1063 AGCAAGTAG 1071
|..||
BL02980___cta 1064 ACTAA---- 1068
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.